Gene Caci_0513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0513 
Symbol 
ID8331840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp596509 
End bp597360 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content73% 
IMG OID644953673 
ProductAminoglycoside N(3')-acetyltransferase 
Protein accessionYP_003111300 
Protein GI256389736 
COG category[V] Defense mechanisms 
COG ID[COG2746] Aminoglycoside N3'-acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.546332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATT CCCTGGAAGC CACGCATCAC GCGCCGATCG TGCGATCCCG ACAGCAGCCG 
TGTTCCCGGC AGCAGCTCGC CGAGGACCTC GTCCGCCTCG GACTCCAGAG CGGCACGGAC
GCCCTTATCA ACTCCTCGCT GCGGGCGATC GGCCCGGTGG ACGGCGGAGC GGCCACGGTC
CTCGCGGCCT TACGCGCGGT GCTCGGCCCC CGGGCGACCG TCGTCGTACC CTCGCAGACG
CCCGCCAACT CCGCCACGTC CAGCGCGCAC CGCGAGGCGG TGGCCGGCAT GACGGCGGTG
GAGATCGCCG GGTACCGGGA ACGCTTTCCC CCCTTCGACC CGGCCCGCAC CCCGTCAGCG
GGCATGGGGG CGTTCGCCGA ACACGTCCGG CTTCAGCCCG GAGCGTGCCG CAGCGGCCAT
CCGACGAGTT CGTTCGCCGC GCTCGGCCCG GCCGCCGAGC GCATCACGGC CCTGCATCCG
CTGCACAGCC ACCTCGGGCC CGAGTCGCCG CTGGGAGCGC TGGCCGAATC CGGGGCTCAG
GTGCTGTTGC TGGGCGTGGG CTTCGCCAAG TGCACGGCGT TCCACCTGGC AGAGTACCGC
GTGCGCCCCG AGACCCGGAC GTACTCCAGC AAGCTGGCCG ACCTCAGCCG GCCCGGAGGC
GGCGGCCGCT GGATCGAGTA CCGGGCGATC CGGCTCGACG CTTCCGACTT CGACCGGCTC
GGCGCTGACC TGGCCGCCTC CCGGTCCTGG GTACGCAACG GCACGGTCGG CGCGGCGCCC
TCGGCGTGCT TCCCCCTGGC CTCAGCGGTT CGGTTCGCGG AACAGTGGCT TTCGGAGCAC
CGACCCGGCT GA
 
Protein sequence
MSDSLEATHH APIVRSRQQP CSRQQLAEDL VRLGLQSGTD ALINSSLRAI GPVDGGAATV 
LAALRAVLGP RATVVVPSQT PANSATSSAH REAVAGMTAV EIAGYRERFP PFDPARTPSA
GMGAFAEHVR LQPGACRSGH PTSSFAALGP AAERITALHP LHSHLGPESP LGALAESGAQ
VLLLGVGFAK CTAFHLAEYR VRPETRTYSS KLADLSRPGG GGRWIEYRAI RLDASDFDRL
GADLAASRSW VRNGTVGAAP SACFPLASAV RFAEQWLSEH RPG