Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0506 |
Symbol | |
ID | 8331833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 586579 |
End bp | 587925 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953667 |
Product | putative cell wall binding repeat 2-containing protein |
Protein accession | YP_003111294 |
Protein GI | 256389730 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.225372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.064309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTT CCATTGGCTT CGGCCTTGCG CTCGTCGCCG TGCTCGGCAC TGGTCTGGGG CCGATCGCTC CGGTGCATGC GGATCCCGCC GCGTCACCCG CGAAGCTGTC GCATGTAAGC CCTCTGTTCC AGCCCTCTCT GACGGTCACA GCGCAGAACG ACCACGGCCT GATCGCTGTC ACGATGCCCG CAGCCGGCGG CCAATACTCG CTGTCCATGG GCGACGGCAC CACGTTGCGC GGCGCCGACA ACCAGCCCGA GATCTATTAC ACCTACCAGG CGAGCGGCCG GTATCTGGTT CAGCTGGCCG ACACCGACGC CGGGGGGTCG ACGGGTACGG CCGCCGTCTG GGTGGACGTG ACTGTCGCGA CCGCACCGCC GCTGGCTCAC GCCGTGGCCC GGATTTCCGG AGGGGACCGC TACGCGACCG CGATCGCGGT GTCGCGGACG GCGTGGACCG GCGGCTCGGC CAAGGCCGTG GTGCTGGCCC GGGGTGATAA GTACCCTGAC GCACTGTCCG GCGTCCCGCT GGCCGCCCAT GTCGGCGGTC CGCTGCTGCT GACCGATCCC ACGGTGCTGG ACACCGCGAC CCGCGCCGAG ATCGACCGCG TCCTCGGGGG CCCGGCGTCC GGCCGGACGG TATACATCCT CGGAGGCACG GCGGCGATTT CGCCGGGGGT GGAAAAAGGT CTGGTCTCTG CCGGCTATCA CGTCGTCCGC TACTCCGGCG CGGACCGGGC CGGAACCGCT CTGGCCGTCG CGCAGCAGGC TTTCACCTCC GCGCCCGGCG CCTTGATCGC CACCGACACC GACTTCGCCG ACGCGCTGGC GGCCGGCCCG CTGGCGGCGG CACTCGGCGA ACCGATCCTG CTCACCGGCC AGTGGACGAT CAGCGACGGT GCCTGGAACT GGCTCCAGCA GCATCCGCGG GTCGGGACGG TCGGCGAACC GGCCCTCGCG GTGATCAGCG AGCGCGCCAT GCACGGTTGG GGCAACATCC GCGCCAACGA CGGCTTCCAG GGTCCGGACC GCTACACCAC CGCGCTCGCC GTCGCGCACG CCATGATCGA CCAGACATCC GGCTCGCTGC CGCCGGGCCG GTCCACCGGG GTGTGCTTCG CCTCGGGCGA GACCTTTCCC GATGCCCTGT CGGGCGGCGC GCTTTGCGCT CTGCAGAACA GGCCGATGCT GTTGCTTCCG GCGACCGGCG GCGAGGGCGA TGTGCTGGCT GCCCTGGACC ACTGGAACGG CGCGCTTTCC CAGGCCGAAC TGTTCGGCGG CCCGGCGGCG CTGTCGCAGA CCGCCGAAGA CCAGGTCGCG CAAGCGCTCA GCTTCACTGA AAACTGA
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Protein sequence | MSRSIGFGLA LVAVLGTGLG PIAPVHADPA ASPAKLSHVS PLFQPSLTVT AQNDHGLIAV TMPAAGGQYS LSMGDGTTLR GADNQPEIYY TYQASGRYLV QLADTDAGGS TGTAAVWVDV TVATAPPLAH AVARISGGDR YATAIAVSRT AWTGGSAKAV VLARGDKYPD ALSGVPLAAH VGGPLLLTDP TVLDTATRAE IDRVLGGPAS GRTVYILGGT AAISPGVEKG LVSAGYHVVR YSGADRAGTA LAVAQQAFTS APGALIATDT DFADALAAGP LAAALGEPIL LTGQWTISDG AWNWLQQHPR VGTVGEPALA VISERAMHGW GNIRANDGFQ GPDRYTTALA VAHAMIDQTS GSLPPGRSTG VCFASGETFP DALSGGALCA LQNRPMLLLP ATGGEGDVLA ALDHWNGALS QAELFGGPAA LSQTAEDQVA QALSFTEN
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