| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0474 |
|---|
| Symbol | |
|---|
| ID | 8331801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 538153 |
|---|
| End bp | 539637 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644953640 |
|---|
| Product | glycoside hydrolase family 11 |
|---|
| Protein accession | YP_003111267 |
|---|
| Protein GI | 256389703 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0285071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCG GCGTCATGGC GCTCCTGCCC GGAACCGCCG GCGCGGCGAC GACCATCTGC
TCCAGCCAGA CCAACACCGT CAGCGGGTAT TGGTACTCGT TCTGGACCGA AGGCAGTGGT
TCGGCCTGCA TGACCTTCGG GTCCGCCGGC AACTACAGCA CCTCCTGGAG CAATGCCGGC
AACTTCGTCG CCGGTCTGGG CTGGAGTACT GGCGGACGCA AGACGGTGAG CTACTCCGGC
AGCTTCAACC CCTCCGGGAA CGGTTACCTG TCGCTGTACG GCTGGACCAC CAACCCGCTG
GTCGAGTACT ACATCACCGA CAGTTGGGGC AGCTACCGGC CGACCGGCAC CTACAAGGGC
ACGGTCACCA GTGACGGCGG CACCTACGAC ATCTACGAGA CGACGCGGTA CAACGAACCG
TCCATCATCG GGACCGCGAC GTTCAACCAG TACTGGGCGG TCCGGCAGTC CAAGCGGGTG
GGCGGCACCA TCACCACCGG CAACTTCTTC GACGCCTGGG CCAGCCACGG CATGAACATG
GGCCAGTACA ACTACATGAT CCTGGCCACC GAGGGCTACC AGAGCAGCGG CAACTCGAAC
ATCACCATCG GCGGCAGCGT CACGAACACG GTGACCGTGA CCAACCCGGG CAGCCAGAGC
ACGACGGCCG GCAGCCCGGC GAGCGTGCAG GTCCACGCCT CGGACTCGGC GTCCGGCCAG
ACCCTCGCCT ACACCGCCTC CGGCCTCCCC CCGGGCTTGT CGATCAACAG TGGCAGCGGG
TTGATCTCCG GGACGCCGAC CACTCCCGGG TCCTACCAGG TCACCGTCAC GGGGACCGAC
ACCACCGGAG CCAAGGGGTC GGCCACGTTC ACCTGGACGG TCGGCTCGGA GACCGGGACC
CTCGTGACCG TCACCAGCCC CGGGAACCAG ACCGGCTCTG TCGGCACCGC CATCAGCCCG
ATTCAGATCC AGGCGACGGA CTCGGCGGGA CAGGCTCTGA CCTATAGCGC CACCGGACTG
CCGGCGGGCT TGTCCATCAG CTCCTCGGGC GTGATCTCCG GTACGCCGAC TGCCGCCGGG
ACCTCCGACG TCACGGTCAC CGCGAGCGAC TCCAGCGGCT CCGGCTCGGC GACGTTCACC
TGGTCGATCA GCGGCGGCGG CACCACCACC GGGGTCTGTC ACGCGACCTA TGCCCGGACC
TCCGAATGGC CCGGCGGGTT CACCGCGAAT GTGACGATCG CCAACACCGG CACCACCGCG
GTCAACGGCT GGACCCTGGG GTGGAGCTTC CCCGGCGACC AGAAGATCAC CAACGCCTGG
AGCGCCACGG CCACCCAGAG CGGCTCGAAC GTGACGGCGA CCAACGTCGC CTACAACGGC
AGCATCGCTC CCGGTGGTAC CACGTCGTTC GGCTTCCAGG GGACCTACGG CTCCAACGAC
AGCAGCCCCA CGGCGTTCAC GCTCAATGGA ACCGCGTGCA GCTGA
|
|---|
| Protein sequence | MLAGVMALLP GTAGAATTIC SSQTNTVSGY WYSFWTEGSG SACMTFGSAG NYSTSWSNAG
NFVAGLGWST GGRKTVSYSG SFNPSGNGYL SLYGWTTNPL VEYYITDSWG SYRPTGTYKG
TVTSDGGTYD IYETTRYNEP SIIGTATFNQ YWAVRQSKRV GGTITTGNFF DAWASHGMNM
GQYNYMILAT EGYQSSGNSN ITIGGSVTNT VTVTNPGSQS TTAGSPASVQ VHASDSASGQ
TLAYTASGLP PGLSINSGSG LISGTPTTPG SYQVTVTGTD TTGAKGSATF TWTVGSETGT
LVTVTSPGNQ TGSVGTAISP IQIQATDSAG QALTYSATGL PAGLSISSSG VISGTPTAAG
TSDVTVTASD SSGSGSATFT WSISGGGTTT GVCHATYART SEWPGGFTAN VTIANTGTTA
VNGWTLGWSF PGDQKITNAW SATATQSGSN VTATNVAYNG SIAPGGTTSF GFQGTYGSND
SSPTAFTLNG TACS
|
|---|
| |