Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0406 |
Symbol | |
ID | 8331733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 452188 |
End bp | 452937 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644953572 |
Product | MgtC/SapB transporter |
Protein accession | YP_003111199 |
Protein GI | 256389635 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.452939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.474699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAT CGATCTTGTG GGAGGAACCG ACCGGGCAGG GCTGGACGCA GGTCGGAGAG CTGACGACGG CCCTGGTGCT GTCCTCGGCG ATCGGGCTGG AACGCGAGAT CCGGCAGAAG GCCGCGGGCT TGCGCACCTA CACGATCATC GGCCTGGGAG CCGCGCTGTT CATGCTGGTG AGCAAGTACG GCTTCACGGA CGTGCTGCGC CCGGGACTGG TCCAGCTCGA CCCCTCGCGG GTCGCGGCGC AGATCGTCTC CGGACTCGGC TTCATCGGCG GCGGCGTGAT CTTCATGCGC CGCGACAGCG TCCGCGGCCT GACCACCGCG GCCGCGATGT GGTTGACCGC CGGCGTCGGC GCGGCGGCGG GCGCCGGCCT GGGACTGCTG GCGTTGCTCA CGACGGTCGC GTATTTCGTG GTGTGCTACG GATTGCGCCC GCTGACCCAC TGGATGCCCG CACTGCGCAC GCCGCCGGTG ACCTACCGCA TCGAGTACCA GGACGGCAGA GGGTTACTCC GCACCATCCT CGACATCTGC ACCGGCGCCG GCTTCTTCGT CGCCTCCTTC AGCGGCACGG GACACGACGA GCGGGACGCC CAGCGCGAGC CCGGCGCGCA TCCGCACACG GTCGAGGTCG TGCTCACGCT GCACGGCCGC GGCAACGCCA ACGCGCTGAC CGAGCAGTTG GTCGACACCT CGGGGATCGT CGCGGTCGCG TACAACCACG AAGACGACGA GTTCACATGA
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Protein sequence | MSASILWEEP TGQGWTQVGE LTTALVLSSA IGLEREIRQK AAGLRTYTII GLGAALFMLV SKYGFTDVLR PGLVQLDPSR VAAQIVSGLG FIGGGVIFMR RDSVRGLTTA AAMWLTAGVG AAAGAGLGLL ALLTTVAYFV VCYGLRPLTH WMPALRTPPV TYRIEYQDGR GLLRTILDIC TGAGFFVASF SGTGHDERDA QREPGAHPHT VEVVLTLHGR GNANALTEQL VDTSGIVAVA YNHEDDEFT
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