| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0397 |
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| Symbol | |
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| ID | 8331724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 442903 |
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| End bp | 444330 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644953563 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003111190 |
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| Protein GI | 256389626 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.264481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0251152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGT CCGGCGACGG TCAGCAGACG CAGGGCCAGA TCGGGGCGCG GCTGCAGGAG
GTGCGCACGC GGCGCGGCCT GACGCAGCGC GCTTTGGCAG AGCCCGGATA CACCGCGGCG
TACGTCTCCA CGCTGGAGGC CGGCAAGGCG CGCGCGTCGG AGGCGGCGCT GCGTTACTTC
GCCGAGCGGC TCGCGATCAG CTACGAGGAG CTGGCGACCG GCGTTCCGGC GGGGCTGCGT
GCGGAGATCC GCGACGGGCT GGCCGAGGCG AACGCGGCGA TGGACGCGGG GCGCGCGGCG
GAGGCCGAGG CGTTGTTGGC GGCGCTGCTG GAGCGGGCGG CGGGCAACGA CGTGCCGGAT
CTGGCGGCGG ATGTGCGCGT CGCGCTCGGG GCGTTCCTGC TGCGCCGGGG CGATCTGGCC
GCCGGGCGCG AGCAGTTCGA GCAAGCCGAG GCGCTGCTCG CCGATCGGCC GCTGGTGGCA
CGAGTGCGCG CGATTCGCGG TCGGGCGACG GCGTACTACC TGGAGGGCGA CGTCCGCTAC
TCCTGCTATC TGCTCGAGAA CACCATCAGC GAGCTGAACG GCGGCGGGCT GCCGGATCCG
GCGTCGCTGG TGCTGCTGTA CGCGGCGGTC ATCGGGCCGT ATCTGGAACT CGGCGCGTTG
GAGCGCGCCA CGAAGGCGGC GACGCTCGCC CTGGACCTGG CACCGCGCGT CGCCGATCCG
ATCGCCGTGG CCACCCTGCA CCGCTCGGTC GCCCGCACCC TGGCCGCCGG CGGACGCTTC
GACGAAGCCG AGGCCGCGCT GGTGAAGGCG CAGGACGTCT ACCAGCAATG GGAGATCCGC
GCCGAACTGG CGCAATGCCA CTGGATGCGC GGCTACCTCT ACGCCCAACA CGAACGCTTC
GCCGACGCCG AAACCGAACT GCGCACCGCC GCGACCATGC TCCGCGCCGC CGACGCGGTG
TTCTACGCGG TCCAGGTCGA AGTCGAACTC GCCGACGTCC GCTGGCGCCT CGGCCACACC
GACGAAGCCG AGCACCTGCT GACCCGCCTG CTCGCCGACC TCGGCCCAGG CCACGGCGCC
GTCCACGCTG CCGCCGCCCA CCGCCTCCTC GGCCTGATCC GCGAACGCGC CGACGACCCC
CAAACCGCCG AACGCCACTA CCGCCAAGCG ATCGAACTCC AGCAGGACGC CGACGTCGCA
GGCGACCTCG CCGACACCTC CCGCCTCCTC GGCGACCTGC TCGACAAGCA GGGCCGCACC
CGCGAGGCGG TGGCGGCCTA CCGGAACGGA CTGACCGCGC TAGCGAGGCC CGGCACGACG
ACCCTCGGCG CCGCACCGCT GCCGCCGCCG GTGATCTCGG CACTGGATTC GGTGCATCGG
GCGGTGCATG TCGTGCCGGG TGGTGGGGAT TCGGCCGCTC ACGAATAG
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| Protein sequence | MPLSGDGQQT QGQIGARLQE VRTRRGLTQR ALAEPGYTAA YVSTLEAGKA RASEAALRYF
AERLAISYEE LATGVPAGLR AEIRDGLAEA NAAMDAGRAA EAEALLAALL ERAAGNDVPD
LAADVRVALG AFLLRRGDLA AGREQFEQAE ALLADRPLVA RVRAIRGRAT AYYLEGDVRY
SCYLLENTIS ELNGGGLPDP ASLVLLYAAV IGPYLELGAL ERATKAATLA LDLAPRVADP
IAVATLHRSV ARTLAAGGRF DEAEAALVKA QDVYQQWEIR AELAQCHWMR GYLYAQHERF
ADAETELRTA ATMLRAADAV FYAVQVEVEL ADVRWRLGHT DEAEHLLTRL LADLGPGHGA
VHAAAAHRLL GLIRERADDP QTAERHYRQA IELQQDADVA GDLADTSRLL GDLLDKQGRT
REAVAAYRNG LTALARPGTT TLGAAPLPPP VISALDSVHR AVHVVPGGGD SAAHE
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