Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0353 |
Symbol | |
ID | 8331680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 397134 |
End bp | 398669 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644953520 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003111147 |
Protein GI | 256389583 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.252559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGT GGCTACCGCT CGTCGCGGTC TGCTTGGGGA CGTTCATGCT GTTGGTGGAC GTCACCATCG TCACCGTCGC CCTGCCCGAC ATGGCCCGGA GCCTGGACAC CACGTTCGCC GACCTCCAGT GGGTCATGGA CGTCTACGCC CTGGTGCTCG CCGCGCTGCT GCTGGCCGCC GGCTCGCTCG GCGACCGCGC CGGGCACCGC CGGCTCTACG TCGCCGGGCT CGTCGTCTTC GCCGCCGCCT CGCTGGCCTG CGGCCTGGCC ACGAGTCCCG GCGTGCTGAT CGCGTTCCGC GCCGTGCAGG GCGTCGGGGG CGCGGCGATG CTGGCCACCA CGGTCGCCCT GATCAGCCAT CTGTATTCCG GGCGCGACCT GGGCACCGCC TTCGGGGTCT GGGGCGCGGT CAGCGGCGCG GCCGCGGCGG CCGGGCCGAT CATGGGCGGG CTGCTCACCC AGCACCTGGA CTGGCGCTGG ATCTTCTTCG TCAACCTGCC GATCAGCGTG GCGGCGGTGG CGATGACGCT GCGGTACGTC GGGGAGTCGC GCGGGGAGCG GCGCCGCGGA CTGGACCTGC CGGGCCTGCT GACGTTCACC GCGGCGGCGG GACTGGCGAC GTACGCGCTG ATCAAGGGCA ACGACTACGG CTGGGGCTCC GCACGCACGA TCGGGGTCTT CGCCGGGGCG GCGGTGGCGC TGGTCGCGTT CGTCGTGGCG GAGCTGCGGG TGCGGACGCC GCTGCTGGAC CTGAGCTTGT TCCGGCGCGG GACATTCACC GGTGTGATGA TCGGTGCGCT GCTGCTGTCG GGGGCGGCGT TCTCCTACTT CGCGTACGAG TCCCTGTGGT TGCAGTCGGC GCTGGGCATG AGCCCGGTGA CGGCCGGGCT GTGCTTCGTG CCGATGAGCG GGGCGGCGTT CGTCACCGCC GGACTCGGCG GGCGGCTGCT GGAGGACCGG CTCTCGCCGC GGGTGATGAT CGGCGGCGGT CTGCTGCTGA TCGCGGCCGG TTCGGCGGCG CAGATGCTGG TCAGCGCCGG GTCGAGCTGG ACCGTGCTGG TGCCAGGACT CGTGGTCAGC GGAGTCGGGG TCGGGCTGGC CACGCCGACG CTGGTGTCGA CGGCGGTCGC CGCGGTCGGG TACCAGCGTG CGGGGATGGC CAGCGGCGCG GTGAACACGG CGCGGCAGCT GGGGAACGCG CTGGGCATCG CGGTGCTCGG GGTGGTGTTC CACGCCGGGC TGGCTTCCTC GGTGCGGGGT GCGGGCGTGC CGCAGTCGGC GGCGGTCGCC GACGCGCTGG CGGCTGGGCA GACCCGCGGC GTGCTGGCAT CGGGACCGGC CGCGCAACGA CCCGCGCTGG AGCACATGGT GCACGCGGCG TTCGCCTCCG GGCTGCGCTC GGCGTTCCTG GCGGCAGCCG TCATGGGAGC GGTCGGCGGC CTCGCGGTGC TGGCGCTCGT GCGGCGGCCC GGCGGCGGTC ACGCACCGGG GGAGCAGTCG AGCGCTGCGA ACGTGCCGAT CCCCGCCGAG GCGTGA
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Protein sequence | MRKWLPLVAV CLGTFMLLVD VTIVTVALPD MARSLDTTFA DLQWVMDVYA LVLAALLLAA GSLGDRAGHR RLYVAGLVVF AAASLACGLA TSPGVLIAFR AVQGVGGAAM LATTVALISH LYSGRDLGTA FGVWGAVSGA AAAAGPIMGG LLTQHLDWRW IFFVNLPISV AAVAMTLRYV GESRGERRRG LDLPGLLTFT AAAGLATYAL IKGNDYGWGS ARTIGVFAGA AVALVAFVVA ELRVRTPLLD LSLFRRGTFT GVMIGALLLS GAAFSYFAYE SLWLQSALGM SPVTAGLCFV PMSGAAFVTA GLGGRLLEDR LSPRVMIGGG LLLIAAGSAA QMLVSAGSSW TVLVPGLVVS GVGVGLATPT LVSTAVAAVG YQRAGMASGA VNTARQLGNA LGIAVLGVVF HAGLASSVRG AGVPQSAAVA DALAAGQTRG VLASGPAAQR PALEHMVHAA FASGLRSAFL AAAVMGAVGG LAVLALVRRP GGGHAPGEQS SAANVPIPAE A
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