Gene Caci_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0329 
Symbol 
ID8331656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp367879 
End bp368469 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content73% 
IMG OID644953496 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003111123 
Protein GI256389559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.330162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG ATCCGTCCTC CCCCGCGCAG CAGCAGCTGC GGGCTGACGC GCTGCGCAAT 
CGCGAGAGCG TGCTCGCCGC CGCGACCGCC GCGTTCGCCG CTTCCGAGGC CGAGCCGTCG
ATGCGCGAGA TCGCCCGGCA GGCCGGGGTC GGCGTCGCCA CGCTCTACCG CCACTTCCCG
ACCCGGGAGG CGCTCGTCGA CGCCGTGTAT CAGGACCAGG TCGTGCGGCT GACCGCCGGG
GCGCGCGACC TGCTCGCCGC GCATCCGCCG GCGCGGGCGC TGCGGCTGTG GATGGACTTG
TTCGCCGACT GGCTGACGAC CAAGCGCGGG ATGACCGGCA CGCTGCTCGC CATGGTCGAC
GCCGGGGACA TCTCGCTAGC GCACACGCGC GGGGAGCTCC TGGCGGCGAT CGCGACGATC
CTCGACGCCG GGATCGCCGC CGGAGAGATC CGCGCGGACA CCAGCGCCGA GGACGTCAGC
GCTGCGGTGC TCGGTCTGCT CGCTGTTTCG GGCGAACGCG GGAATCCCGA GCAGGCGCAA
CGACTTCTCG ACGTCCTGAT GGACGGGCTC AGGACTCGAT CAGAGCGCTG A
 
Protein sequence
MTADPSSPAQ QQLRADALRN RESVLAAATA AFAASEAEPS MREIARQAGV GVATLYRHFP 
TREALVDAVY QDQVVRLTAG ARDLLAAHPP ARALRLWMDL FADWLTTKRG MTGTLLAMVD
AGDISLAHTR GELLAAIATI LDAGIAAGEI RADTSAEDVS AAVLGLLAVS GERGNPEQAQ
RLLDVLMDGL RTRSER