Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0288 |
Symbol | |
ID | 8331615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 325731 |
End bp | 326642 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953455 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_003111082 |
Protein GI | 256389518 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCGCC GGTATTCTGA GCGCGTGATC ACCGGTCTGA ACCACCTCGC CAGCGGCAAG ATCCGCGACC TGTACGCGGT CGGCGACGAC CTGCTCCTCG TCGCCTCCGA CAAGATCTCC GCCTTCGACT ACGTGCTGGA GTCCGAGATC CCGGACAAGG GCCGGATCCT CACCCAGCTG TCCATGTGGT GGTTCCGCCA GCTCGCCGAC CTGGTGCCGA ACCATGTGAT CAGCGCCGAC GTCGAGCAGT TCCCGGCGGA GTTGCAGCCC TACAAGGAGG AGCTGCGCGG GCGCTCGATG CTCTGCCGCA AGCTGAGCAT GGTGCAGGTC GAGTGCGTGG CGCGCGGCTA CCTGACCGGC TCCGGGCTGG CCGAGTACGA GCGGACCCGC ACCGCCAACG GCGTGCCGCT GCCGCCCGGG CTGGTCGACG GCTCGCGGCT GGACCGCCCG ATCTTCACCC CGGCGATGAA GGCCGAGGTC GGGCAGCACG ATGAGAACGT CAGCTTCGAG GACATGGCCG AGCGGATCGG CGACCCGGAG CTGGCCGCGC AGCTGAAGGA CCTGACGCTG GCGGTCTACT CGCGGGCCCG CGAGATCGCC GAGGAGCGCG GGATCATCCT GGCCGACACC AAGTTCGAGT TCGGGCGGCT GCGCGGCGGG ACCCTGGTCC TCGCCGACGA GGTGCTGACC CCGGACTCCT CGCGTTTCTG GCCGGCGGAC GAATGGAAGC CGGGACGCAC GCAGTCCTCG TTCGACAAGC AGTACGTCCG CGACTGGCTG AGCTCCCCGG CCTCGGGCTG GGACCGCAAG TCCGACACCC CGCCGCCGGT GCTGCCGGAG GAGGTCGTGC AGGCGACCCG GGCCCGCTAC GTCGAGGCCT ACGAGCGCCT CACCGGAGCG AAGTTCGACT AG
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Protein sequence | MNRRYSERVI TGLNHLASGK IRDLYAVGDD LLLVASDKIS AFDYVLESEI PDKGRILTQL SMWWFRQLAD LVPNHVISAD VEQFPAELQP YKEELRGRSM LCRKLSMVQV ECVARGYLTG SGLAEYERTR TANGVPLPPG LVDGSRLDRP IFTPAMKAEV GQHDENVSFE DMAERIGDPE LAAQLKDLTL AVYSRAREIA EERGIILADT KFEFGRLRGG TLVLADEVLT PDSSRFWPAD EWKPGRTQSS FDKQYVRDWL SSPASGWDRK SDTPPPVLPE EVVQATRARY VEAYERLTGA KFD
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