Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0269 |
Symbol | |
ID | 8331596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 303169 |
End bp | 303735 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953436 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003111063 |
Protein GI | 256389499 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.764981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGTG AGAAGCGTGA CCGGGACCGT GACAGAGACC GTGATGGGAA CGACAGACGC GGAATCGAGG AAGCCGAGTT CCGCGAGTAC ATGGTCAGCC GGTGGGGTGG TCTGGTCCGG TTCGCCTACG GTCTGACCGG CGACCGCGGC CACGCCGAGG ACCTGGCACA GACCGCGCTG GCGAAGGCGT ACGCGTCCTG GTCCAGAGTG CGGCGTGCGG ACGACCCGGA CGCCTACGTC CGCAGGATCC TGATCAACGC CAACCACCGC CGCTTCCGCA AACGCCGGGT CGACGAGCAC GCCGGTCCCG GCGCCGCGGC GCGCGAGCCT GTCGTCACCG ACGGCACCGC CGCGTTCGAC CAGCGCGAGG CACTGGTCGC CGCGCTCATG GAGCTGCCGC CGAAACAGCG CGCGGTGGTC GTGCTCCGCT ACTGGGACGG CCTGACGGAG ACCCAGGCCG CCACGGTGCT CGGCTGCTCG GTCGGCACCG TGAAGAGCCA GGCCTCGCGC GCCCTGGCCA AGCTCCGCAC CAGCACACAG CTTCAGGACG GGAAGGTGAT CTCGTGA
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Protein sequence | MRGEKRDRDR DRDRDGNDRR GIEEAEFREY MVSRWGGLVR FAYGLTGDRG HAEDLAQTAL AKAYASWSRV RRADDPDAYV RRILINANHR RFRKRRVDEH AGPGAAAREP VVTDGTAAFD QREALVAALM ELPPKQRAVV VLRYWDGLTE TQAATVLGCS VGTVKSQASR ALAKLRTSTQ LQDGKVIS
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