| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0247 |
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| Symbol | |
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| ID | 8331574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 276573 |
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| End bp | 277136 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644953414 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003111041 |
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| Protein GI | 256389477 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.440757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.202243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATAGGCA GGCTCACCCA AGAGGAGCTC GCGGACTTCA CCGCGTTCGC CCAGGCCCGG
CAACGCCACC TGATGCGGAC GGCGTTCCTG CTGAGCGGCA ACCGCCAATC CGCGCAGGAC
CTGACCCAGA CGGCGCTGCT CGACCTGTGC CGCAGCTGGC GCCGGGTACG GCGCGCCGAC
GACGTGGACG CCTACGCCCA CCGGGTCCTG ATCAACGCCT TCCGGACCTC GGCACGTAGG
TCGGACCGAG AGCGCAAAGC CTTGTGGCGC AAGGCTTCCG AAGCTGCCGG GTCGCCGGCC
GACGGCGCGG CGCCGGACCA GTCCGTGGGC ATGCGGCTGT CGCTGCTGGC AGCGCTGGAC
CGGCTGCCGC CGAAGGCGCG CGCCGTCGTC GTCCTGCGGT ACTGGGAGGA CCTCAGCGTG
GAGGCGACGG CCGCCGCGCT CGGGTGCTCG ACCGGCACCG TCAAGAGCCA GTCCTCGCGC
GCCCTGGCCA GGCTGCGCGC GCTGCTCGGC GACGGGTTCG CCACCACTGA TTCCGAGCAC
TGGGAGATCT CGTATGGAAA CTGA
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| Protein sequence | MIGRLTQEEL ADFTAFAQAR QRHLMRTAFL LSGNRQSAQD LTQTALLDLC RSWRRVRRAD
DVDAYAHRVL INAFRTSARR SDRERKALWR KASEAAGSPA DGAAPDQSVG MRLSLLAALD
RLPPKARAVV VLRYWEDLSV EATAAALGCS TGTVKSQSSR ALARLRALLG DGFATTDSEH
WEISYGN
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