Gene Caci_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0174 
Symbol 
ID8331500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp186609 
End bp187907 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content72% 
IMG OID644953342 
Producthistidine kinase 
Protein accessionYP_003110970 
Protein GI256389406 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGAAT CGGCGACGGT CCAGCGGTGG ATCCCGTACG CGGGCCTGGC GGTCTCCCTG 
ACTCTGGCCC TCATCATCGG TCCCCGGACC GGGGTGTACT ACACCGTGGT CCTCGGGGGC
TCCGCGGCTG CGGCGCTGTG GGTCCGGCGC GGGCGGGCGC TGCTGGACGC GCCGAACCCG
CCGGTGCTGC GCGCGACGGT CTACTACGCG GTCCTGCTGG CGCTGCTCGC GACGCTGATC
CTGACCAGCC CGCTGTTCGG CTTCTTCGGC TTCACCGGCT ACCTGCACGC GATGGTCTTG
CCGGGACGGA CCAAGCTCTT CGGGATCGCG GGAACCGCCG GCGCCATGGC GACCACGCAG
ATGGGCGGCA TCGTCAACAT CCACGGCGCC GGCGTCTATC TCTACCTGGT GCTGGTCGCG
GTCAACCTGC TCATCGCCGG CACGTTGACG GTCACCGGCG CGGCCGAGGA GGAGCACCGG
CGCGAGCTGG CCGAGGCGAA CGAGCGGCTG CACGAGATGC TCGAGGAGAA CGCGGGACTG
CACGCGCAGT TGGTCGCGCA GGCTCGGGAG GCCGGGGTGC TCGACGAACG CCAGCGGCTC
GCGGGGGAGA TCCACGACAC CATCGCGCAG GGACTCACGG GGATCGTGCG GCAGCTGGAG
GTCGTGGAGC GGTTCGACGA CGACGTGGAG CGCCGGAAGC ATCACCTGAC GCTGGCCCGG
GAACTGGCGC GCGAGAGCCT GGCCGAGGCA CGCCGGTCGG TCCAGGCGCT GCGGCCGGGA
CCGCTGGCCG TGGCGCAGCT GCCGGAGGCG CTGGCGGAGC TGGCGGCGTC GTGGTCGCGG
ACGGCGGGGA TCGAGGCGCG GGTGGAGGTT TCCGGGGAGG CTGTCGCGCT CTCGCCGGAG
GTGGAGGTGG CGCTGTTCCG GGCGGCGCAG GAAGCGTTGG CCAACGCCGG GAAGTATTCG
GGGGCGGGGC GTGTGGGGGT CACGGTGTCC TACACGAGCG ATGTCGTGGT TCTGGACGTG
GTGGACGACG GCGCGGGGTT CGACCCCGAA GAGGTGCGGA GGCGTGGCGC CGACAGCGCG
TCGGAGAACG GGACGGGCTA CGGATTGAGC GCGATGCGGT CGCGGCTTCG GCAGGTCGGC
GGGACGCTCA CTATCGAGAG CGAGCCTGGG GACGGCACAG CCATCAGCGC CGCGGTGCCC
TTGGTGACGC TGGCGGCGGA GACGGCTTCG GCGGGGGCGA GCGCGAGAGC GAGCACCGGA
GCCGTGGCGG AGGCGGTGAC GGAGGCGGTG ACGGGGTGA
 
Protein sequence
MVESATVQRW IPYAGLAVSL TLALIIGPRT GVYYTVVLGG SAAAALWVRR GRALLDAPNP 
PVLRATVYYA VLLALLATLI LTSPLFGFFG FTGYLHAMVL PGRTKLFGIA GTAGAMATTQ
MGGIVNIHGA GVYLYLVLVA VNLLIAGTLT VTGAAEEEHR RELAEANERL HEMLEENAGL
HAQLVAQARE AGVLDERQRL AGEIHDTIAQ GLTGIVRQLE VVERFDDDVE RRKHHLTLAR
ELARESLAEA RRSVQALRPG PLAVAQLPEA LAELAASWSR TAGIEARVEV SGEAVALSPE
VEVALFRAAQ EALANAGKYS GAGRVGVTVS YTSDVVVLDV VDDGAGFDPE EVRRRGADSA
SENGTGYGLS AMRSRLRQVG GTLTIESEPG DGTAISAAVP LVTLAAETAS AGASARASTG
AVAEAVTEAV TG