| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0162 |
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| Symbol | |
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| ID | 8331487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 172943 |
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| End bp | 173746 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644953329 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003110958 |
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| Protein GI | 256389394 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00177695 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTCG GGTTGCGTGG CCGGGTTGCT GTCGTCACCG GCGGGAGTAA GGGTATCGGG
CTTGCTGTTG TCAGGACGCT GCTGGAGGAG GGGGCGTTTG TTGTGGCTGT CTCGCGGGCG
GGGTCGGCGG GGTTGGGGGA GGTGGGTGGG CCGAATCTGC TGCATGTGGC TGGTGATCTG
ATGGATGCGG GGTTTGCGGC GGAGGTGGTT GAGCAGACTG TTGCGGCGTT CGGGGGGCTG
GACATTCTCG TGAACAACGC TGGGGGTCCG CCGCCTGGGG TGGTGCTGCC GCGTGGGCCT
TTCTTGGGTG GCGGGGATGT GGATTGGCAG GCTGTCTTCG ACTTCAATCT GTTCGCTGTC
GTGCGGCTGA CGCGGGTTGC TCTGCCGCAT CTGATTGAGC GGGGCGGGAC GATCGTCAAT
GTCTCCTCGA CGCTGGCTCG GCAGCCTGCC ACCAACAATT ACGAGTACTC GGCTGCGAAG
GCGGCGCTCA GCCATGTGTC CAAGGGCTTG GCTGAGGAGT TCGGGCCGCA GGGGGTGCGG
GTGAACACGG TGCTGCCGGG GGTTACGCGG ACCAACTGGT GGACCGATGA GGGTGGGGTC
GCGGACATGT TCGCCGGGGC GATGGGGATT GATCGGGACA CGTTGCTGGA CAAGGCGTTG
CCCGAGTCGT TGCGGTTGAG CATGGGGCGG ATTGTGGAGC CGCAGGAGGT CGCCGATGCG
GTGGTGCTGT TGGCGTCGCC GCGGTCGCGG AGTACGAATG GGTCCGAGTT CGTTGTGGAC
GGCGGGCTGC TGAAGGAGCT GTAG
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| Protein sequence | MDLGLRGRVA VVTGGSKGIG LAVVRTLLEE GAFVVAVSRA GSAGLGEVGG PNLLHVAGDL
MDAGFAAEVV EQTVAAFGGL DILVNNAGGP PPGVVLPRGP FLGGGDVDWQ AVFDFNLFAV
VRLTRVALPH LIERGGTIVN VSSTLARQPA TNNYEYSAAK AALSHVSKGL AEEFGPQGVR
VNTVLPGVTR TNWWTDEGGV ADMFAGAMGI DRDTLLDKAL PESLRLSMGR IVEPQEVADA
VVLLASPRSR STNGSEFVVD GGLLKEL
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