| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0160 |
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| Symbol | |
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| ID | 8331485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 170983 |
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| End bp | 171954 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644953327 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003110956 |
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| Protein GI | 256389392 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0641212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC GCGTGGTGTT CCTGGTCTTT CCGCGCTTCC AGCTGCTCGA CCTCACCGGG
CCGCTGGAGG TGTTCTCGCA GGCGGACATG CTGTTCTCGC CGGGGCGGCA GCGGTATGTG
ACCGAGGTGG TGGCCCTCGG CGCCGAGCCG GTGACGGCGT CCGACGGGTT GGCGGTCGTG
CCGCACCGGA CGCTCGCCGA CGCCGCCGAG CTGCCGATCG ACACGTTGGT GGTGGTCGGC
GGCCGTGGAG TCCGGACCGC GATGACGGAT CCGGTGTACG TCGAGTGGGT TCGGGCGGCG
GCCGGCCGGG CGCGGCGGGT CACGTCGGTG TGTTCCGGGA CGTTTCTGCT GGCGGCCGCG
GGGTTGCTGG ACGGCCGGCG TGCGGTCACG CACTGGGATT CCTGCGAGGA GTTGGCGGAG
CGGTTCCCGG AGATCCGGGT CGAGGCGGAC CCGATCTTCG TCCGTGACGA CCCGTTGTGG
ACCTCCGCCG GGGTCACGGC CGGCGTGGAC CTCGCGTTGG CGCTCGTCGA GGACGACCTC
GGCGCGGAGG TGGCGCGGCG GATCGCCAAG CAGCTGGTGG TGTTCGTGCA GCGGCCGGGC
GGACAGGCAC AGTTCAGCAC GCAGCTGGCG GCGCAGCGTC CGGGGCGTGA CGCGTTGCGC
GAGACGCAGA CGTGGATCGC CGACCATCTC GACGACAACC TCAGCCTGGC GGCGCTGGCA
CGGCGCGCGG CGCTGAGCGA ACGGCACTTC TCGCGCGTGT TCCGCGCCGA GACCGGGATG
ACGGTGGCGG CGTATGTCGA GGCCGCCCGG ATCGAGGCGG CGCAGCGTCT GCTGGAGAGC
ACGCGCGACG GCCTCGACCG GATCGCGCGC ACCTGTGGCT TCGGCACGGT CGAGACCATG
CACCGCACCT TCAACCGGAC GATCCGGGTC ACGCCCGGGG AGTACCGGCG GCACTTCAGT
TCCCCCAGGT GA
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| Protein sequence | MSRRVVFLVF PRFQLLDLTG PLEVFSQADM LFSPGRQRYV TEVVALGAEP VTASDGLAVV
PHRTLADAAE LPIDTLVVVG GRGVRTAMTD PVYVEWVRAA AGRARRVTSV CSGTFLLAAA
GLLDGRRAVT HWDSCEELAE RFPEIRVEAD PIFVRDDPLW TSAGVTAGVD LALALVEDDL
GAEVARRIAK QLVVFVQRPG GQAQFSTQLA AQRPGRDALR ETQTWIADHL DDNLSLAALA
RRAALSERHF SRVFRAETGM TVAAYVEAAR IEAAQRLLES TRDGLDRIAR TCGFGTVETM
HRTFNRTIRV TPGEYRRHFS SPR
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