Gene Caci_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0154 
Symbol 
ID8331479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp164306 
End bp164869 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content73% 
IMG OID644953321 
Productprotein of unknown function DUF501 
Protein accessionYP_003110950 
Protein GI256389386 
COG category[S] Function unknown 
COG ID[COG1507] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG ACGCTCCTAC CCCCGACACC TCCCGACCCG CGCCCGCGGC CGCGCCAGAG 
GCCGACGCTG TCAGCCAGGC CGACCTGGCC GCCGTCGAGG CGCAGCTGAG CCGTACGCCG
CGCGGCGTGC GCCGGGTCGC GCACCGCTGC CCGTGCGGCA ACCCGGACGT GGTCGAGACC
GCGCCGCGGC TGCCCGACGG CACGCCGTTC CCGACGCTGT TCTACCTGAC CTGCCCCAAG
GCGGCCTCGG CGATCGGGAC CCTGGAGGCC TCGGGCTTGA TGAAAGAGAT GACCGAGCGC
CTGAAGACCG ATCCGGAATT GGCCGCCGCC TACCGCGCGG CCGACGAGGA GTACCGGGCT
CGGCGCGACG CCATCGAAGT TCTGGACGGC TTCCCGACCG CCGGCGGCAT GCCGGACCGG
GTGAAGTGCC TGCACGTTTT GGTCGGCCAC ACGCTGGCCG CCGGCCCTGG GGTGAACCCG
CTGGGCGACG AGGCGCTGGC GCTGCTCCCG GAGTGGTGGA AGTCCGGGCC ATGCGTCACA
CCGAGCGAGG AACCGGGTGC ATAG
 
Protein sequence
MTNDAPTPDT SRPAPAAAPE ADAVSQADLA AVEAQLSRTP RGVRRVAHRC PCGNPDVVET 
APRLPDGTPF PTLFYLTCPK AASAIGTLEA SGLMKEMTER LKTDPELAAA YRAADEEYRA
RRDAIEVLDG FPTAGGMPDR VKCLHVLVGH TLAAGPGVNP LGDEALALLP EWWKSGPCVT
PSEEPGA