Gene Caci_0148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0148 
Symbol 
ID8331473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp158807 
End bp160081 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID644953315 
ProductCyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_003110944 
Protein GI256389380 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACC CCGCGCCCAC CCCCCTGATC GACACCGACC GCTGGCCCGA CCTCGCGCGG 
GTTCCGGACC GGCCGGTGCG GGCGCGCATC GCGCGCCGCT TGTTCACCCA CGCGCTCAAG
GACGTCCCGG TCACCGTGGT GGCGCCCAAC GGACTGGCGC TGGCCGGCGC GGGCGTCCCC
GGCGGCGGCG GACCGGTGCT GCGCGTGCGG CGGCCCAAGG AGTTCCTGAA CCGGCTGGGC
TCGGACGGCC TGATCGGCTT CGGCGAGGCC TACCAGACCG GCGCGTGGGA CACCGAGACC
GGCGACGAGC TGGTCGCGCT GCTCACCGAG CTGGCCTCCC GGCTGGAGGA CCTGGTCCCC
AAGCCGCTGC AGCGGATGCG CAGCCTCGCG GCCCACCACA TGCCCCGCGA CCAGGACGGC
GACCGGCACG GGGCGCGCCA CAACGCGCAC GCGCACTACG ACCTGTCCAA CGACATGTTC
GAGGCGTTCC TCGACCCGTC GATGACCTAC TCCGCGGCGC TGTTCGACCC CGTCGCCGAC
GCCGACGGTC CCGGCGACCT GCACGCCGCG CAGCTCCGCA AGATCGACGC GATGCTCGAC
GCGGCCGGCG TGCGCAAGGG CACCCGGCTG CTGGAGATCG GCTCCGGCTG GGGCGGTCTG
GCGATCAAGG CGGCCGGCGA GCGCGGCGCC ACGGTGCTGA CCGTGACCCT GTCGGAGGAG
CAGCAGGAGC TGGCGCGCAG GCGTATCGCG GCGGCGGGCC TGGCGGGACG GATCGAGGTG
CGCCTGGCCG ACTACCGCGA GGTCGCCGAG GAGCAGCCGT TCGACGCCGT GGTCTCGGTG
GAGATGATCG AGGCGGTCGG CCGCCGCTAC CTGCCGGACT ACTTCCAGGC CATCGAGCGC
AACCTGGCCC GCGGCGGCCG GGTCGCCGTC CAGGCCATCA CCATGGCCCA CCACCGCATG
CTGGCGACCC AGGACTCGTA CTCCTGGATC CACAAGTACG TCTTCCCCGG CGGTCTGATC
CCCTCGATCC CCGAGCTGGA CTTCGCCGCC GAGACCGCCG GCCTGCGCCT GGCGGCCCGC
CGCGACTTCG GCCTGGACTA CGCCCGCACC CTGCGCGCCT GGCGCCACCG CTTCGAGGAG
AACTGGCCGA AGGTCGCCGG GCACGGCTTC GACGAGGTCT TCCGCCGCAC CTGGCGGTTC
TACCTGGCCT ACTGCGAGGC CGGATTCGCC TCGGGCTACC TCGGGGTCTC GCAGCTCACG
TACACGCGGC CGTGA
 
Protein sequence
MTHPAPTPLI DTDRWPDLAR VPDRPVRARI ARRLFTHALK DVPVTVVAPN GLALAGAGVP 
GGGGPVLRVR RPKEFLNRLG SDGLIGFGEA YQTGAWDTET GDELVALLTE LASRLEDLVP
KPLQRMRSLA AHHMPRDQDG DRHGARHNAH AHYDLSNDMF EAFLDPSMTY SAALFDPVAD
ADGPGDLHAA QLRKIDAMLD AAGVRKGTRL LEIGSGWGGL AIKAAGERGA TVLTVTLSEE
QQELARRRIA AAGLAGRIEV RLADYREVAE EQPFDAVVSV EMIEAVGRRY LPDYFQAIER
NLARGGRVAV QAITMAHHRM LATQDSYSWI HKYVFPGGLI PSIPELDFAA ETAGLRLAAR
RDFGLDYART LRAWRHRFEE NWPKVAGHGF DEVFRRTWRF YLAYCEAGFA SGYLGVSQLT
YTRP