Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0104 |
Symbol | |
ID | 8331429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 107482 |
End bp | 108756 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644953271 |
Product | proteinase inhibitor I4 serpin |
Protein accession | YP_003110900 |
Protein GI | 256389336 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4826] Serine protease inhibitor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00414663 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0601662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACGCA AGCAGATAGC CGCGATCACC GCCGCATCCC TCGCCGCCCT GACGGCGTGC TCGTCCTCCG GAAGCTCTTC GTCGGCGGGC GGCTCCCTGG TGCGCGTCAA CGCCGCGCGG GCGACCGTCG GGCAGGCCGA TCTGAGCGCC GCCTCGGCCG GCGTGAACGC GTTCGGCGTC GACGTCTTCC ACTCCGTCGC CGACGGCGAC GAGGGCAACG TCATGATCTC GCCGACCAGC CTGGCCACGG TGCTGACGAT GCTGCTGCCC GGCGCGAAGG GGCAGACCGA GGCCCAGATG GCCAAGGCCC TGCACACCAC CATGACCGCC GACCAGTTCG CCGACGCGCT CGGCGCCCTG GACTCGGCGA CCGTGCAGCG CGAGCTCGCC GACAAGGCAG AGCTGCAGCA GTACGACACC GTGTGGACGC AGAAGGGATA CGACATTCAG CCGTCCTATC TCCAGACCCT CGCCTCGGCC TTCGACGCCG GCGTCCGCGA GACCGACTTC ACGAACTCCG AGAGCGCGCG CCAGACGATC AACAAGACCG TCGAGGATCA GACCAACGGA CTCATCAAGG ACCTCTTCGG TCCGGGCTCC ATCAGTCCCG CGACCCGGCT CGCCCTCACC GATTCCCTAT ATCTCAAGGC GAAGTGGGCC GACGCGTTCG CCAAGAGCGC GACCTCGGAC AAGCCGTTCC ACCTGACGAA CGGCAGCACC GCGAACGTCC CGACGATGGG CAAGGAGCAC AGCTTCGCCT ACGCCCACGG CGCCGACTGG CAGTACGCGG AGCTGCCGTA CCAGCAAGAT CACCTGGCGA TGGGCATCCT TCTCCCGGCA TCCGGGTCCT TCGACACCTT CCGCAAGTCG CTCACCGGCG ACAGCCTCGC CACGATGACC GCCTCGGCCA CGCCGTCCCC GGTCGACCTC GAGCTGCCGA AGTTCACGTT CGACACCAGC CGCGATCTGA AGTCTCCGCT GGAGTCCCTG GGCATGCAGA CTGTCTTCGA CCCGAACTCG GCGGACCTGA GCGGGGTCCC GGCCAAACCC GAGTCGCTGT TCGTCGGAGC CGTCGTGCAG AAGACCCACG TCGCCGTCGA CGAGGACGGC ACCACAGCGG CCGCGGCCTC GGGCGTCACC GTCGTCGCCG GCGCCGCGCC GCAGCAGTCC CCGCCGGCGG AAATGCACGT CGACCGGCCT TTCCTCTTCT TGATCAGGGA CACCGTGACG GGCCAGATCC TGTTCCTGGG CCAGGTGAGC GACCCACGCG GCTGA
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Protein sequence | MPRKQIAAIT AASLAALTAC SSSGSSSSAG GSLVRVNAAR ATVGQADLSA ASAGVNAFGV DVFHSVADGD EGNVMISPTS LATVLTMLLP GAKGQTEAQM AKALHTTMTA DQFADALGAL DSATVQRELA DKAELQQYDT VWTQKGYDIQ PSYLQTLASA FDAGVRETDF TNSESARQTI NKTVEDQTNG LIKDLFGPGS ISPATRLALT DSLYLKAKWA DAFAKSATSD KPFHLTNGST ANVPTMGKEH SFAYAHGADW QYAELPYQQD HLAMGILLPA SGSFDTFRKS LTGDSLATMT ASATPSPVDL ELPKFTFDTS RDLKSPLESL GMQTVFDPNS ADLSGVPAKP ESLFVGAVVQ KTHVAVDEDG TTAAAASGVT VVAGAAPQQS PPAEMHVDRP FLFLIRDTVT GQILFLGQVS DPRG
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