Gene Caci_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_0042 
Symbol 
ID8331367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp44241 
End bp45053 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content74% 
IMG OID644953209 
Productprotein of unknown function DUF881 
Protein accessionYP_003110838 
Protein GI256389274 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCAG GGCGCGATCA GCTGGACGAA CCCGAATCGG CGGACGGCCC GGAGCCGGCC 
GGCGGGCCCG CCCCCCGACC GCGGTCGCGG GTGGCCTGGC ACACCGGGGT GGTCCTGGTG
TTCGCCCTCG CCGGAGCGCT GTTCCTGACG GCCCGGGACA CCGCCGACGG GCAAGGCGAC
ATCCGTCCGG ACCGGGGTGC CCAGCTCTCC GACGTGATCC GGGCCCAGAA CACCCACAAC
CAGCAGCTTA CCGAGCAGGT GGCCGGGCAG CGCGCGGACC AGGACGCGCT GACCCGCGGG
CAGAGCGCCG ACGCCCGGGT CAAGGCGGTC CAGGACCAGG TCGACGCGCT GGCCGCGCCG
GTGGCCCTGA CCCCGGTCAG CGGCTCGGCG CTGGCCGTGA CCCTCAACGA CGCGCCGCCG
AACGCCCAGC CGGCCGCCGG GGCGCCGACG GCGCAGCCGG ACTGGCTGAT CATCCACCAG
CAGGACGTGC AGGCCGTGGT GAACGCGCTG TGGGCCGGCG GCGCGACCGG GATCCAGCTG
ATGGACCAGC GCCTGGCGCC CACCTCGGCG GTCCGCTGCG TCGGGAACAC CCTGCTGTTG
CAGGGCCGGG TCTACTCCCC GCCGTATGTG ATCACCGCGG TCGGCGACAC GGCGAAACTG
CGCTCCTCGC TGCTGGCCGC CCCGGCGGTG CAGACCTATC TGGAATACGT CAGCGCGTAC
GGGCTCGGGT GGGACGTGAA GGCACGCGAT CGAGTGACGC TCCCGGGCTA CACCGGACCG
CTCGACGTGT CGTTCGCCTC TGTGGCGCCG TGA
 
Protein sequence
MASGRDQLDE PESADGPEPA GGPAPRPRSR VAWHTGVVLV FALAGALFLT ARDTADGQGD 
IRPDRGAQLS DVIRAQNTHN QQLTEQVAGQ RADQDALTRG QSADARVKAV QDQVDALAAP
VALTPVSGSA LAVTLNDAPP NAQPAAGAPT AQPDWLIIHQ QDVQAVVNAL WAGGATGIQL
MDQRLAPTSA VRCVGNTLLL QGRVYSPPYV ITAVGDTAKL RSSLLAAPAV QTYLEYVSAY
GLGWDVKARD RVTLPGYTGP LDVSFASVAP