Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0035 |
Symbol | |
ID | 8331360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 34710 |
End bp | 36773 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953202 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_003110831 |
Protein GI | 256389267 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCTTG TGCTCAGGTA CGCGATCCGC TCCCATGTCG GGCTGATCCG GGAGGGCAAC GAGGACTCCG GTTACGCCGG CCCGCGGCTG CTGGCGATCG CCGACGGCAT GGGCGGCGCC GCCGCCGGTG AGCTGGCCAG CGCTGTCGTG ATGACGACGG TCTCGCGGCT GGACTCCCCC GGCGGCGAGG ACCTGCTGTC CGGCACCGGG GAGATGCCCG TGATGGCGCC CGGCGGCGCC GGTCCCGGCC AGGGCCAGCC TGCTCCCGGC GCCCCGGGCG GCGGTCCGGG CGGTCAAGGC GGTCCCGGCG GCGTGCCGGA GAACGAGCAG ACCCTGCACA TCTCCCAGCA CGACATGGCC GCCCGCGAGT CCGGCAACGC GCACTCGCCG GCCGACCCCG CCTTCGGCGA GCCCGACCTG GCGCTGCTGG GCGGCGCGGT GGTGGCGGCC AACGAGCGGC TGCGCGCGAT CGTGGCCGAG CGCCCGGAGC TGGAGGGCAT GGGCACCACG CTGACCGCGA TGCTGTGGTC CGGCGGCCGT TTCGGCATGG TGCACGTCGG CGACTCCCGT GCCTACCGCC TGCGCGACGG CCTGCTGGAG CAGATGACCG CCGACCACAC CTGGGTGCAG CGCCTAATCG ACGAGGGCCG GATCACCGAG GAGGAGGCCG GCCACCACCC GCAGCGCTCC CTGCTGATGC GCGTCCTGGA CGGCCGTACG CAGGTCGAGG CGGACATCGG CACCTTCGAC GCCTACCCCG GCGACCGCTA CCTGCTGTGC TCGGACGGTC TGTCAGGATT CGTCTCCCAG GAGACCCTGG CTGAAACCCT GGCCGCCTAC GCCGATCCGC AGCAGGCTGT CGACGCCCTG ATCGAGCTGG CTCTGCGCGC CGGCGGTCCG GACAACATCA CCTGCATCGT CGCCGACACC CTCGACGACG GCACGATCCC CGGCGCCAGC CCGAACGAGT CCACGCAGAT GCTGGGGTCG CTGACCCCGG TGGTGGTCGG CGCGGCCAGC GAGGGCGTGG AGCAGCTGCC CCGGTTCAGC ACCCAGGGTT CCGGCGGGCC CGGTCCCGGT CCGCAGCAGG ATGATTTCCC GCAGAACCAC CCGGCCGGCC GCGCCGCCCG GCTGCGTTCG CGCCGCAACC AGAACCAGAA CTCGCAGAAC CAGAACGCCC AGAACCAGCA GCTGGCCGCC GAGCAGCATC CCGGCGGACC GGTGACCACC GCGCAGCAGC AGTTCGACCC CTCCGCCCAG ACCACTGAGC TGGACTCGGT GCCCGGGCAG CGAGGTCTGG TGCCCGGCGC GGAGAACCAG CAGCCCGGGT CGCGGCGCAA TGCCGACGGC GGGTACGGCG GCGCTCCCGA CGGTGGTCCC GGAGGTCCCG GCGGACCGGC TCCGGCCAAG CGGGGCAAGA AGGGCCTGAT CATCACCGGC GCGGTGGTCG TGGTGCTGGC CGCGGCCGCG GGCGGGGCGT ACGTGTACAG CCAGGGGCAG TACTACGTGA CGCCGTCCAC GGACAGCAAG CAGGTGCTGC TCTACCAGGG CTTGTCGCAG GTGTCGTTCG CCTCGTCGCA GCAGACGATG TCCGAGGGTC CGCTGTGGAT CGCCTCGGTA CCGCAGAGCA AGCGCGCCGA CCTGTTCAAG ACCGAGTCCT TCGGCTCCAA GGGCGCCGCG CTGAGCTACC TGGAGCAGTA CCGGTCGGCC GCGAAGTCCT GTGCCGACTA CCGGCACAAC CAGCTGGTCG TCCAGAGTCA CCCACAGCAG AGCGCCGTGA CCGGCAAGAC GGCGGGCACC ACGGTGCCGG GGCAGAACCT CGCCCCGTCC GCGCCGCCCA CGTCGTCGAA GGCCGGCGCC CCGCTGGCCA ACGGTCCGGC GAACACTGTG CAGAACCCCA CCGCGCCGAC CGGCGACCCC GCCGGCACGA CCGCCCCGAC CGGCGGCGAG CAGGGGTCAC CGGAGCCGCA GAATCCCACG TCGTCCCCCT CGGCGCCCGC GTCGCAGCCC GGTGACGACC CGCAGATGAA GGCGTACTGC GCCGGAACAA CGGACGGTCC TTAG
|
Protein sequence | MALVLRYAIR SHVGLIREGN EDSGYAGPRL LAIADGMGGA AAGELASAVV MTTVSRLDSP GGEDLLSGTG EMPVMAPGGA GPGQGQPAPG APGGGPGGQG GPGGVPENEQ TLHISQHDMA ARESGNAHSP ADPAFGEPDL ALLGGAVVAA NERLRAIVAE RPELEGMGTT LTAMLWSGGR FGMVHVGDSR AYRLRDGLLE QMTADHTWVQ RLIDEGRITE EEAGHHPQRS LLMRVLDGRT QVEADIGTFD AYPGDRYLLC SDGLSGFVSQ ETLAETLAAY ADPQQAVDAL IELALRAGGP DNITCIVADT LDDGTIPGAS PNESTQMLGS LTPVVVGAAS EGVEQLPRFS TQGSGGPGPG PQQDDFPQNH PAGRAARLRS RRNQNQNSQN QNAQNQQLAA EQHPGGPVTT AQQQFDPSAQ TTELDSVPGQ RGLVPGAENQ QPGSRRNADG GYGGAPDGGP GGPGGPAPAK RGKKGLIITG AVVVVLAAAA GGAYVYSQGQ YYVTPSTDSK QVLLYQGLSQ VSFASSQQTM SEGPLWIASV PQSKRADLFK TESFGSKGAA LSYLEQYRSA AKSCADYRHN QLVVQSHPQQ SAVTGKTAGT TVPGQNLAPS APPTSSKAGA PLANGPANTV QNPTAPTGDP AGTTAPTGGE QGSPEPQNPT SSPSAPASQP GDDPQMKAYC AGTTDGP
|
| |