Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0021 |
Symbol | |
ID | 8331345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 22500 |
End bp | 23396 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644953187 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003110817 |
Protein GI | 256389253 |
COG category | [K] Transcription |
COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCACG GTCGCGGCCA CACTGTGGGG ATGAGCCCAG CACGCAGCGT ATTAGCTGAA GAACTCGGTC GGCGTCTGCG TCGGCACCGA CTGGACCTCG GCTTGTCCGG ACTCGAAGTC GCCGCCCGCG CCGGTGTCAC CCAGCCCTCG GTGTCGAAGA TCGAACGCGG CATGATGCTC CCCTCCACCG AGGTGCTGGA GCGCGTGCTC GGCGTCCTGG GCCTGGCCGA CGAGCACCGC ACCGACCTGC GCGACCTGCT CACCCGGGCG GTCGACGACG CCGCCGACCG CCGCCGGCAC GGCCGCGGCC TGGCGCTGCT GGACGCGATC GCCGAGCGCG AGCGCAACAC CACGGCCCTG CGGTCGTTCT CCACCTCGAT GATCCCGCCC CTGCTGCAGA CCGCCGACTA CGCCCGGTAC GCCGCGCGCC TGACGCCGTG GATGTCAGAG CGCGAACTCG GCCGCGCCTC CGCCCTGCAC CTGGAGCGCC AGGGCGTGCT GTTCGAACAG GGACGCAGCT TCGAGTTCCT GCTCACCGAG AGCGCCCTGC GCCTGTGCCC GGGTCCGCCC ACGCTCGCCG CGACCCAGGC CGACCGGCTG CGCGTGCTCT CGGCGCTGCC CGGCGTGCGG ATCGGCATCG TCCCGGACTC GGCCGCGGTC TCGGAGGTGT TCCCGCTGTA CGGGTTCACG CTCCACGACG ACGCGGCCGT GGCCGTGGAA ACCTTCACCG GCGAGTTGCT GCTCTCTCGC GCCGACGAGA TCGCCGCGCA CGCCGCGGTC CTCGACGGCT ACGCGGCCGG CGCCGACTAC GACCTGGAGA CGGCCACCGG ACTTCTCACG AGTGACAGGC GCCCGCTGGC GTCTATCCCG GCGCCGGCCG GGGCAGGAAC CGGCTGA
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Protein sequence | MVHGRGHTVG MSPARSVLAE ELGRRLRRHR LDLGLSGLEV AARAGVTQPS VSKIERGMML PSTEVLERVL GVLGLADEHR TDLRDLLTRA VDDAADRRRH GRGLALLDAI AERERNTTAL RSFSTSMIPP LLQTADYARY AARLTPWMSE RELGRASALH LERQGVLFEQ GRSFEFLLTE SALRLCPGPP TLAATQADRL RVLSALPGVR IGIVPDSAAV SEVFPLYGFT LHDDAAVAVE TFTGELLLSR ADEIAAHAAV LDGYAAGADY DLETATGLLT SDRRPLASIP APAGAGTG
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