Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0019 |
Symbol | |
ID | 8331343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 20593 |
End bp | 21360 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953185 |
Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
Protein accession | YP_003110815 |
Protein GI | 256389251 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTATT GGTCTCGCTC CTTCCCCGGA CTGGCCGAGA ACCTCGCCGA GGTCCGCCAG TTCATCCAGA TGGTGCTCGG CGACGCGCCG GGCGCGGAGC TGGTGGTCCT GGCCGGGTCC GAACTGGCCG GCAACGCCAT CGTGCACACC GCCAGCGGCG CGCCCGGCGG CCAGTTCGTG GTGCACCTCG CGGCCTTCGC GGACCGCTGG CAGGTGCGGG TCGACGACGC GGGCTCGCCG ACCGAGCCGC GTGTCCTGGT CGACAGCATG GACGAGCACT GCGACTGGGA CTCGGAGTCC GGGCGCGGGC TGGCGATGGT CGCCTCGATC TCCCGGAAGT GGGGCGTGCT CGGCGACCGG GCCGCGCGGG CGGTGTGGGC CGAGATCCCT TGTCCCGTCC CGCCCGGCGG CGGGATCGAG TCGGTGATGT CCGGCGGCAT GCTCGAAGCC TTGGAGTCCG TGGCACGCGC GCTGGAAAAC GAAAATCGGC CGCCGTATCA GGAACTTGAT ACTTCTTCAG CCACCGCGCC CGCGACGGCC GCTGTCCCTT CTGTGGCCAT CGCGCCGGCG CGGTGGCCTG GAACGATGCC CAGCGATCCG GCGCGGGCCG AACGGATCCG GCGGCAGGCC AGCCACGCCG CCTTCCAGCG CGCGCTGATC GAGAGCGCGT ACGCCGAAAC GCTCGGGCCG CGTCCGCTGC CGTACTGGCC ACCGTTCCCG AATCCGCTTG CTCTGCAAGG GTCTTCGCCC GGGACGCGTC CTCGATAG
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Protein sequence | MSYWSRSFPG LAENLAEVRQ FIQMVLGDAP GAELVVLAGS ELAGNAIVHT ASGAPGGQFV VHLAAFADRW QVRVDDAGSP TEPRVLVDSM DEHCDWDSES GRGLAMVASI SRKWGVLGDR AARAVWAEIP CPVPPGGGIE SVMSGGMLEA LESVARALEN ENRPPYQELD TSSATAPATA AVPSVAIAPA RWPGTMPSDP ARAERIRRQA SHAAFQRALI ESAYAETLGP RPLPYWPPFP NPLALQGSSP GTRPR
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