Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_0015 |
Symbol | |
ID | 8331339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 16967 |
End bp | 17629 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953181 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003110811 |
Protein GI | 256389247 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGC ACGTTGACTA CGCGGCACAA AGGGCCTTCT CACGGATCAT CGCCGGTCTG CGCTCGGCCC GCTTGGACGC CGAACTCTCG CAGAACGCCC TCGCCACCGG GCTGCCGGTC CGGGGCAGGG CGGTCTCCGA GTGGGAGACC GGGGCGATAG AACCGACCCT GGGCCACCTG ATCCAGTGGT CCTGGGAACT GGGGCGGCGG CTGGTGATCG TCGGGCGCGA CGGCGAACTG CGCTACGGCC CGGTGCGCCA GCGGCCGGGC GAGTTGTGGG AGGCCTTCGA GCGACGGCGA CTGGCCGTCC CGTTACGGAA CCGCCGCCTG GCCTTGGGTA TGGCGCAAGG CGAACTCGGC GAACTCGTCG GTGTCAGCCG CGATTCGATC CAGCGGTGGG AGCTGGTCCG CGTGCCCCCG AGACCGATCG CGCACGTCGT GTGGGCGCAG AAACTCGGGT ACTCACTGGA TACTCGCCCT GTCGCGGACG GCGGCCCGCG TCTGCGGCGT GTCGGCTCCG CGGGGCTGGC GCTGCCAGGA CTGTCAGGGC AGATAGGGCA GCAAGGACAA CCAGGGCTGA CGGGACAAGC AGAGCGCTCG GCGTCCGGAC CCGGCTCGCC CGCCGGTGAG CTTCGAGCCG CTGCGGACGG TCGGCGTGGA TGA
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Protein sequence | MALHVDYAAQ RAFSRIIAGL RSARLDAELS QNALATGLPV RGRAVSEWET GAIEPTLGHL IQWSWELGRR LVIVGRDGEL RYGPVRQRPG ELWEAFERRR LAVPLRNRRL ALGMAQGELG ELVGVSRDSI QRWELVRVPP RPIAHVVWAQ KLGYSLDTRP VADGGPRLRR VGSAGLALPG LSGQIGQQGQ PGLTGQAERS ASGPGSPAGE LRAAADGRRG
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