| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0001 |
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| Symbol | |
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| ID | 8340452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 370 |
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| End bp | 2082 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953166 |
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| Product | chromosomal replication initiator protein DnaA |
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| Protein accession | YP_003110797 |
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| Protein GI | 256389233 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000116219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.231349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCC GCCGGTACCA CCAGGGCCGA CAGCACAGAA TGGAGCCGCA GGCCGTGTCC
GACCCGCAAG GCTACACCCC GGTCCCGCAC CCGCCGGCCG CCCCTGGCGA CGCCATCGCC
CTGTGGTCCC ACTTCCGCGC CCGCGTGGAG TCCGACAGCT CGCTGACCAA GAGCGAACAG
GCCTTCCTGA TGATCCCGGA GGCCCGGACC GTGATCGGCG ACACGATCGT GCTCGCCGTC
CCGGACGACT TCTCCAAGAA CTATCTGGAG CAGCGGCTCG AGCCGATGCT GACCACCCAT
CTGGCCGCTA TGTTCGGCCC GGACATCAAG TTCAGCCTGT TCGTCGACAA GATCATGGAG
AACACCCCGG CGCCGGCCGC GGCCGGCCCG GTCGCGCCGC CCGCCCCGGT CATCCAGCAG
CTCGCTCCGC CCCCGGCGCA CTGGACGCCG CCGCCGGCGA TGCAGTCCGG CGCCGAACTG
CAGGTCCCGG CGGCTTTCCA CAGCGATCCG CCGGCCTTCG CCCCCGACGT GCCCCGTCCC
GGACTCGGCG GCATGGCCCT GCCCCCGCCG CGCGTCTCCG AGCCCGCCCC CGAGGAGAAC
GATCCGATAG CGGCCACGCT GTCGCTGTCC ACAGGCCGTC CCGGAGCACG CTCCTCGACG
CCCGACGACG GCGCCAAGGC CCAGCAGGCC AAGCTCAATG AGAAATACGT CTTCGAGACC
TTCGTCATCG GCTCCAGCAA CCGGTTCGCG CACGCCGCGG CGGTCGCCGT CGCCGAGGCG
CCGGCCAAGG CCTACAACCC GCTGTTCATC TACGGCGACT CCGGCCTGGG CAAGACCCAC
CTGCTCCACG CGATCGGCCA CTACGCGCGC AACCTGTATC CGGGCACCCG CGTGCGCTAC
GTGTCGACCG AGGAGTTCAC CAACGACTTC ATCAACGCGA TCCGCGACGG TGCGGGCAAC
CACCTGCGCA AGCGCTACCG CGATGTCGAC ATCCTGATGG TCGACGACAT CCAGTTCCTG
GAGAACAAGG AGGGGACGCA GGAGGAGTTC TTCCACACGT TCAACACCCT CCACAACGCC
TCCAAGCAGA TCGTCATCTC CAGCGACCGG CCGCCCAAGC AGCTGAACAC CCTGGAGGAC
CGGCTTCGGT CGCGGTTCGA GTGGGGTCTG ATCACCGACA TCCAGCCGCC CGAGTTGGAG
ACGCGGATCG CGATCCTTCG CAAGAAGGCG CAGCAGGAAG GCCTGAACGC GCCGCCGGAG
GTCCTGGAGT TCATCGCCTC GAAGATCTCC ACCAACATCC GCGAACTGGA GGGCGCGCTG
ATCCGGGTCA CCGCGTTCGC CTCGCTGAAC CGGGCGCCTG TCGACTTGTC GCTGGCCGAG
GACGTCCTGA AGAACCTGAT GCCCGACGCG GCCGGTCCGG AGATCACGGT CTCGACGATC
ATGGCGCAGA CCGCGATGTA TTTCGGGATC ACCATGGAGG ACCTCTGCGG GACTTCCCGC
AGCCGCATCC TGGTGACCGC CCGGCAGATC GCCATGTATT TGTGTCGGGA GCTGACCGAC
CTGTCACTGC CCAAGATCGG GCAGGCGTTC GGCGGCCGGG ATCACACCAC GGTCATGCAC
GCCGACCGCA AGATCCGCTC GCTGCTCCCC GAGCGCCGCG CCATCTTCAA CCAGGTCACC
GAGCTCACCA ACCGCATCAA ACAGTCCGGC TGA
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| Protein sequence | MPARRYHQGR QHRMEPQAVS DPQGYTPVPH PPAAPGDAIA LWSHFRARVE SDSSLTKSEQ
AFLMIPEART VIGDTIVLAV PDDFSKNYLE QRLEPMLTTH LAAMFGPDIK FSLFVDKIME
NTPAPAAAGP VAPPAPVIQQ LAPPPAHWTP PPAMQSGAEL QVPAAFHSDP PAFAPDVPRP
GLGGMALPPP RVSEPAPEEN DPIAATLSLS TGRPGARSST PDDGAKAQQA KLNEKYVFET
FVIGSSNRFA HAAAVAVAEA PAKAYNPLFI YGDSGLGKTH LLHAIGHYAR NLYPGTRVRY
VSTEEFTNDF INAIRDGAGN HLRKRYRDVD ILMVDDIQFL ENKEGTQEEF FHTFNTLHNA
SKQIVISSDR PPKQLNTLED RLRSRFEWGL ITDIQPPELE TRIAILRKKA QQEGLNAPPE
VLEFIASKIS TNIRELEGAL IRVTAFASLN RAPVDLSLAE DVLKNLMPDA AGPEITVSTI
MAQTAMYFGI TMEDLCGTSR SRILVTARQI AMYLCRELTD LSLPKIGQAF GGRDHTTVMH
ADRKIRSLLP ERRAIFNQVT ELTNRIKQSG
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