Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_5040 |
Symbol | |
ID | 3519429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 5358464 |
End bp | 5359204 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637287479 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_271678 |
Protein GI | 71279071 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTC AAGTGGATAT TGCTGGCGTC AATAATAAAG CGACGGTTAG CCAAAATACT GTCATTGAAA CGACTCATTT GTGTAGAGAA TTTGGTCAAG GTGATACGTT AGTTAAAGCG CTGACTGATG CCAATATCAC CATAGAACGA GGTGAATTTA CCGCGATAAT AGGCCCTTCT GGCTCAGGTA AATCAACTTT ATTGCAATTA ATTGGTGGTT TGGATAATTC AAGTTCAGGT GATGTGTTTT TAGATAATAA AAATATTAAT CGTATGACAG GCACCGAGTT GTCAGATTTC AGACGTGATC ATATTGGCTT TATTTTTCAA GCCTATAACT TGATACCTGT GTTAAGCGCC CGAGAAAACA TTGAGTATAT TATGTTACTG CAAGGCGTAC CTACAGCAGA GCGAAACAAA CGCGTAGATA AGCTAATGCA TGCGGTAGGT TTAGAAGGTT TGGGAGATCG TCGCCCTGCT GAATTATCAG GGGGGCAACA GCAACGCGTA GCCGTAGCAA GGGCTATGGT ATCAAAGCCT AGTATTATTT TAGCGGATGA ACCGACAGCT AATCTAGACT CGAAAACAGG TGCTGATTTG CTTGATATGA TGAAAGAATT AAATGAAAAG CAAAATATGA CCTTTGTATT TTCAACGCAT GATCCAAAGA TAATGGAACG AGCCAAACGT ATTATTCGTT TGGTTGATGG CTGCATTGTT GATGATGAGC GCAGAAGTTA A
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Protein sequence | MTTQVDIAGV NNKATVSQNT VIETTHLCRE FGQGDTLVKA LTDANITIER GEFTAIIGPS GSGKSTLLQL IGGLDNSSSG DVFLDNKNIN RMTGTELSDF RRDHIGFIFQ AYNLIPVLSA RENIEYIMLL QGVPTAERNK RVDKLMHAVG LEGLGDRRPA ELSGGQQQRV AVARAMVSKP SIILADEPTA NLDSKTGADL LDMMKELNEK QNMTFVFSTH DPKIMERAKR IIRLVDGCIV DDERRS
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