| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5023 |
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| Symbol | |
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| ID | 3519207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5338866 |
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| End bp | 5340269 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637287462 |
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| Product | sugar transferase domain-containing protein |
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| Protein accession | YP_271662 |
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| Protein GI | 71279278 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGTT CGAAATTTCG TGATTTATCA GCAGGTACTA AATCTTTAAT TATTGTAGAA
CAAATCTTAT TTGTTGGAGC TTTGATTTTA GCTGTTCATT TGAACGGGGA ATATCAAATT
GTTGATTTTA TAGTGGTATC TGATGGTTTC TTATTACTCT ATGCTGTTAT TTTTGCCCTA
TTTAATCAAT TAAGTGCCTT AGCGCTAGGA TTGTACAACT CAAAACTGAG AGAAAGTTTT
CGAGGGATTT TTCGTCGCAT GTTGATGTGT GTCTCTATCG GGTTTTGTGC GACAACACTC
ATTAATCCTT TTTATGGGGT TTATCATTTA CCAATAGAAT TATTGGCTAT CGCCTCTTCA
CTTAGTGTTT TTCTAGTCAG TTCTTTTCGC TATTTTACCT TTAAAATAGA TTTCTTTGGT
TTTGGCAAAC GTAATATTTT GGTATTAGGC TCTGGACAAC GAGCATCAAT TATAGAAAGG
CGTATGCGAC GTGATGTTGA TCGGCAAGAC TTCACTGTGC ATGGTTTTGT TATCATGGAA
GGTGATTCAG CTGATGGGAT TCAGCATGAA ATACGCATCA AGCTAAATGA ATCATTAGTT
GAATACACCT TAGCCCATGA TATTGATGAG ATAGTCGTCG CTAATGACGA GCGTCGTAAT
AACTTGCCTG TAGATGAGTT GTTTGCTTGC AAGATCCGCG GTATTGAAAT TATAGATATA
TTGGATTTCA TTGAGCGTGA AACCGGACAA ATAGCCGTTA ACCTTATTTA TCCTAGCTGG
GTCATTTATT CTAATGGCTT CGCCTCTAAT AATTATTTAC GTAATACCTT AGATTGGATC
TTTAATGCAG GAATGGCACT GATCTTGTTA TTACTTACTT GGCCGGTGAT GCTTATTACT
GCGTTGTGTA TGAAGATCAC CGAAGGTCTT AATGCGCCAA TCTTTTATAA ACAAGAGCGG
GTTGGCTTAG ATGGTGAACT GTTTAATATG ATCAAATTTC GTAGTATGCG TTTAGATGCA
GAAAAAAACG GTGCCCAAAT GGCAAGCGAA AACGATAACC GTATTACAAA AGTCGGTCAG
TATTTACGTA AATATCGTAT TGATGAACTG CCACAAATTT GGAATGTTTT GCATGGTAGT
ATGGGTTTTG TTGGACCAAG ACCTGAACGA CCTCAATTTG TGAAAAGCCT TATTAATAAT
ATCCCTTATT ATAACGAACG TCATAATGTT AAACCAGGTT TAACCGGTTG GGCGCAATTA
AAATACCCTT ACGGCGCTAC GGAGGCTGAT TCTTTAGAAA AGCTGAAATA TGATTTGTAT
TATATTAAGC ACCGTAGCTT TCTCTTGGAT TTATTGATAT TAATTCGAAC GTTTGAAATT
GTGTTATTTG GTAAAGGAAG ATAA
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| Protein sequence | MSSSKFRDLS AGTKSLIIVE QILFVGALIL AVHLNGEYQI VDFIVVSDGF LLLYAVIFAL
FNQLSALALG LYNSKLRESF RGIFRRMLMC VSIGFCATTL INPFYGVYHL PIELLAIASS
LSVFLVSSFR YFTFKIDFFG FGKRNILVLG SGQRASIIER RMRRDVDRQD FTVHGFVIME
GDSADGIQHE IRIKLNESLV EYTLAHDIDE IVVANDERRN NLPVDELFAC KIRGIEIIDI
LDFIERETGQ IAVNLIYPSW VIYSNGFASN NYLRNTLDWI FNAGMALILL LLTWPVMLIT
ALCMKITEGL NAPIFYKQER VGLDGELFNM IKFRSMRLDA EKNGAQMASE NDNRITKVGQ
YLRKYRIDEL PQIWNVLHGS MGFVGPRPER PQFVKSLINN IPYYNERHNV KPGLTGWAQL
KYPYGATEAD SLEKLKYDLY YIKHRSFLLD LLILIRTFEI VLFGKGR
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