| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5009 |
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| Symbol | |
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| ID | 3520115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5324373 |
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| End bp | 5326343 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 637287448 |
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| Product | putative lipopolysaccharide modification acyltransferase |
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| Protein accession | YP_271648 |
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| Protein GI | 71279655 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1835] Predicted acyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.131159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTATTATA GGAAAGAAAT TGATGGTCTT AGAGCTATAG CGGTGATGCC GGTTATATTC
TTTCATGCTG GTTTTTCTAG CTTTAGTGGG GGATATATCG GTGTAGATAT CTTTTTTGTC
ATTAGTGGGT ATTTAATCAC TTCTATTCTC CTGAAAGAAA TGGAAAATGA TAAATTTTCA
CTACTTAGCT TTTATGAACG ACGTGCGCGA AGGATCCTAC CCGCATTATC TGCTGTATTG
ATTGTTACAA GTATCGCGGC ATTTTGTTTA ATGCCGGCAG AGCTATTAAA ATCTTATTCA
CAAAGTGTTG TGGCTGTTGT AACTTTTTCG TCTAACATTT TTTTCTATTT AACCAATGGT
TACTTTTCTA CGGCTTCAGA TGAAAAACCT TTACTGCATA CGTGGAGTCT TGCCGTAGAG
GAGCAGTACT ATTTATTTTT CCCTATTTTA ATGTCAGCAT TATGGTCTAA AGGCAAGAAA
TACTTATATA GTTTGTTATT TATAATGACG GTAATTTCAT TGTTTTTTGC TCAGTATTTG
GCGATGAATA ATCATATTGA TGCAAATTTT TATCTTATAT TTAGCCGTGC TTGGGAGTTG
TTTATTGGCT CTTTAATCGC TTTCGGTAAG CCGATTAGTG TTGCGGATAA AAGGATTCGA
AACGAGCTAG GAGGAATTGT AGGCTTACTG TTGATCATCT ATTCGATCTT AACATTTGAT
AATGAAACAC CATTTCCTAG TTTTTACACC TTGATACCAG TTCTCGGGAC TGGATTTATT
ATTAGGTTTG CGCATGCCGA GACTTATATT GGGCGCCTTC TTTGCAATAA TTTATTTGTT
TCTATTGGGC TTATTTCTTA TTCCCTATAT TTATGGCACC AGCCAATCTT TGCCTTTTTA
AGATTGAAAA CCATTGGAGA ACCCCTGAAT ATTTGGTTTT ATATGGCAAT TATTTTGACT
TTTTTTCTTG CCATCACGAG CTATCGGTAT ATAGAGAAGC CTTTTAGAAA TAAATCAGCT
TATTCTAAGA AGGCAATTTT TAAATTGTCC GGTATATCGT TAAGTCTGTT CTTATTAATA
GGCGTATTAG GGCATGTAGG TAATGGTTTT AAAGGTCGAT TTCCTGAGAA TAAATTTACA
GATTCTATTA AGTTCAGCCC AAAACGTGAA GCCTGTCATA CTCAGGGCGA TTCATTTTTA
AAACCTTCGG CAGCGTGCAG GTACTTTGAA AAAGATGTTA AATGGGCAAG TTTTGGTGAT
AGCCATATCG TTGAACCAAC CTATGCATTA GCCAAACAAC TTGAGGAAAA TAACCTTGGA
ATATTACATT TGAGCTTTAG TGGCTGCCCA CCAGCACTAT TGTTTGATGT AAATGTAAAA
GGGTGCTCAG AATGGATAAA GCAGTCATTG GACTATTTGG AGAATGATAA GACAATAACT
AATGTCTTAT TGGGTTTTAG ATATAGTGAA TTTTTATTTG GCGGGCAACA ACATAACTAC
CCTGAACTGC CAAACATTAG CCCTAAAAAT CGAATTAAAG TTACGCAGAA AAGTCAATCT
ACAGCTGAGT TAAGAGATAT ATACTGGGAT AGCTTAGATG CAATTGTTCA GCGGTTACTC
AGGGCAGGAA AAACTGTACA TATTATGTAT CCAATACCAG AAATGCCATT ACATGTTAAT
AAAGCCATTT CACCCTTCTC TATATTCAGT GACGAATCAA TGTTAGATCT CGAACAGTCG
GTTTCTAAAA GCTACTACAT GAGAAGAAAC GAGTTTATTA TTAACAAATT AAATTCTTTA
GTATACGGAG ATAAGCTATA TCGAATTAAG CCATTTGAGC GTCTATGTGG AGAAAGTTAT
TGTTCGATAA TACATAAAGG AAGTGCATTA TACTTTGATG ATAATCATTT GAGTTTAACT
GGTGCTGAAT TACTCATGAG AGATATAGCG AAAAATCACC GTAAATCATA A
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| Protein sequence | MYYRKEIDGL RAIAVMPVIF FHAGFSSFSG GYIGVDIFFV ISGYLITSIL LKEMENDKFS
LLSFYERRAR RILPALSAVL IVTSIAAFCL MPAELLKSYS QSVVAVVTFS SNIFFYLTNG
YFSTASDEKP LLHTWSLAVE EQYYLFFPIL MSALWSKGKK YLYSLLFIMT VISLFFAQYL
AMNNHIDANF YLIFSRAWEL FIGSLIAFGK PISVADKRIR NELGGIVGLL LIIYSILTFD
NETPFPSFYT LIPVLGTGFI IRFAHAETYI GRLLCNNLFV SIGLISYSLY LWHQPIFAFL
RLKTIGEPLN IWFYMAIILT FFLAITSYRY IEKPFRNKSA YSKKAIFKLS GISLSLFLLI
GVLGHVGNGF KGRFPENKFT DSIKFSPKRE ACHTQGDSFL KPSAACRYFE KDVKWASFGD
SHIVEPTYAL AKQLEENNLG ILHLSFSGCP PALLFDVNVK GCSEWIKQSL DYLENDKTIT
NVLLGFRYSE FLFGGQQHNY PELPNISPKN RIKVTQKSQS TAELRDIYWD SLDAIVQRLL
RAGKTVHIMY PIPEMPLHVN KAISPFSIFS DESMLDLEQS VSKSYYMRRN EFIINKLNSL
VYGDKLYRIK PFERLCGESY CSIIHKGSAL YFDDNHLSLT GAELLMRDIA KNHRKS
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