| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_5004 |
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| Symbol | |
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| ID | 3521199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5319903 |
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| End bp | 5321213 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637287443 |
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| Product | O-antigen polymerase family protein |
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| Protein accession | YP_271643 |
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| Protein GI | 71280730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGAC AATTCCCTGA ACAAGAAAAC ACTGATTCCA CTTTTGCTTT TTTCTTCTTA
GTGTTATATA CCGCATCAGT ATTGATACGA CCGCACGAAA TGTTTCTCTC TAGTGTGGAA
TGGATCACTA TCAAAGTGTT TGCCATCATC GCCTTCATCG CCACTATTGC AGCACAACGT
CCCCTAAAGC TTTATTCACA GCACTGGATG CTATTAGGTT TAATCCCCCT CATCGTCGTT
TCAGGATTTT TGAATGGCTC GGGTATGGAT GGTGTTGAAC AGGCACGAAA GTTATTTATT
AGCGCTATAA TTCCTCTTTT TTTATATAGC AGCTGTATTA CCAGCATCAA ACGTCAACAT
ATTCTAATGC TAATATGTAT TGTTGCTGCA CTTTTTATGG TTCACAATGG CCACACTCAA
CAAACTGGCT ATTTAGGTTA TGGCTGGGCT TTAGATACCC ATTCGGTTGG TTACCTTAGT
TTAGGCGAAA AAAGAATTAC TTATTTAGGT TTCTTTAACG ATCCCAATGA CCTTGGCATG
TTTCTGGTGA TGAATATCCC CTTTACTTTA TACTTTTATA CAAAAGGTAA CTTCTTAACA
AAGGTCACCA TGCTTGCCGC ACTTACTGCT TTAGGCTATG GCATTTATTT AACCGGCTCT
CGAGGAACCA TGTTAGGAGT AGGCGCTTTA CTTGGGATTT ATTGGCTCGT TATGAGCGCA
GGTCCAAAAT TATTTATTGC GGCAGCAATT TTATCGCCAA TTGCAGCAAC GGTTATCACG
TCTTTGCAAA GTAATATTGA TTCTTCAATA GACGGACGCT TAGAAGCTTG GTACGCGGGA
ATATTGATGT TGATATCTAA TCCAATATTC GGCGTGGGTA CAGGGAACTT TATGGAGGAA
CACGAAAGAG TTGCCCATAA CTCTTATATC CACATTGCTG GTGAGCTTGG AATTCCAGGT
TACTCTTTAT GGGGTGGAGC GCTTGTATTT ACAGCTTTAG TGGGTTACTT ATTTATAATA
AAAACACAAT CACCAGAAGA GTACAATACT GAATGCAAAA ATGAATTAGC CTTAAATAAA
ACTTTATTTT TCTCAATGAT AGGTTTTATG ATTACAGCTT TTTTCTTGAG TCGCTCTTTT
ACATTATTAC TATTTATATT TATGGGAATG ACTATTGCGT CACATGTTCG TTTAATCAAG
TTAATGCCTG AACTTAGCAC TATTTTCAGT AAAGCTAATG CAATAAAGTC AATGGGGTAT
TGCTGGGTCA TTATAGTTGC TGTGTATATT TCTTTGAAAA TGGGATTGTA A
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| Protein sequence | MARQFPEQEN TDSTFAFFFL VLYTASVLIR PHEMFLSSVE WITIKVFAII AFIATIAAQR
PLKLYSQHWM LLGLIPLIVV SGFLNGSGMD GVEQARKLFI SAIIPLFLYS SCITSIKRQH
ILMLICIVAA LFMVHNGHTQ QTGYLGYGWA LDTHSVGYLS LGEKRITYLG FFNDPNDLGM
FLVMNIPFTL YFYTKGNFLT KVTMLAALTA LGYGIYLTGS RGTMLGVGAL LGIYWLVMSA
GPKLFIAAAI LSPIAATVIT SLQSNIDSSI DGRLEAWYAG ILMLISNPIF GVGTGNFMEE
HERVAHNSYI HIAGELGIPG YSLWGGALVF TALVGYLFII KTQSPEEYNT ECKNELALNK
TLFFSMIGFM ITAFFLSRSF TLLLFIFMGM TIASHVRLIK LMPELSTIFS KANAIKSMGY
CWVIIVAVYI SLKMGL
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