| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4952 |
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| Symbol | |
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| ID | 3522429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5254312 |
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| End bp | 5256102 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637287391 |
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| Product | sodium/solute symporter family protein |
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| Protein accession | YP_271591 |
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| Protein GI | 71281957 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAGT TAAAACTCTA TACTTACATC GCAGTATTTA GCACGTTTGC TTTATACTTT
GCTATTGCTT GGTGGGCTCG TGCGGGTTCA ACCAGTGATT TTTACGTAGC GGGCGGTGGT
ATTACCCCAA TGCAAAATGG TATGGCAATT GGTGCCGATT GGATGAGTGC AGCGTCATTT
ATCTCAATGG CAGGTTTAAT TGCCTTTTTA GGTTACGGTG GCTCAGTTTT CTTAATGGGT
TGGACAGGTG GTTATGTATT ATTGGCAATG CTTTTAGCAC CATACATGCG TAAACACGGT
AAGTTCACAG TACCTGAATT CATTTTTGAT AGATATTACT CAAAAACTGC ACGTATTGTT
GCGGTTGCTT GTTTAATAAT CGCTTCATTA ACTTACATCA TCGGTCAAAT GAAAGGAGTG
GGTGTTGCTT TCTCTCGTTT CTTAGAAGTT GATTACGGTT TAGGCTTAGG CATCGGCATG
TTCGTTGTTT GGGTATACGC TGTACTAGGT GGTATGAAAG GTATTACTTA CACGCAAATC
GCTCAGTATG TAGTAATGAT TTTTGCTTAT ACCATTCCAG CAATCTTTAT TTCATTACAA
CTTACCGGTA ACCCAATTCC ACAACTAGGC TTAGGTAGTA CTTTAGCTGA TGGTAGTGGT
GTTTACTTAC TTGATAAGTT AGATATGGTT GTTACTGATT TAGGCTTTAA AGAGTACACA
ACAAGTAACT TAGGCGGAAC ATTGAATATG TTCGCTTACA CTATCTCTCT TATGATTGGT
ACTGCGGGTC TTCCTCATGT AATTATGCGC TTCTTCACTG TTCCTTCAGT ACAAGCAGCA
CGTCAATCTG CAGGTTATGC ACTTGTTTTC ATCGGTTTAC TTTACACAGT TGCTCCAGCA
GTTGGCGCTA TGGCTCGTCT TAACTTGATG AATACCATTG AACCTACAGC AGGTCAGAAC
CTTGTTTATG ATGAACGCCC ACAATGGTTC AAAGACTGGG AAAAAACTGG TTTATTGAAG
TTTGAAGATA AAAATGGCGA TGGCAAAATT CAGTATACAT CTAATGCAAC AGATCAAACT
GTCACCAAAA TAAATACAAT GACTGGGAAA GAAATAGTAG TGGTTCCAAA TGAAATGGTT
AAAGTTGACC GTGACATTAT GGTACTAGCT AACCCTGCAA TTGCGAATTT ACCTAACTGG
GTAATTGCTT TAGTTGCTGC TGGTGGTCTA GCGGCTGCGT TATCTACTGC GGCGGGCTTA
TTGTTAGCAA TATCCTCATC TATCTCACAT GATTTAATGA AAGGGGTATT AACACCTGAC
TTGTCAGAGA AAAATGAGTT ACTTGCCGGT CGAGTTGTGA TGACTATAGC GATATTAGTC
TCTGGTTATC TTGGATTACA TCCTCCAGGG TTTGCTGCAG GTACGGTTGC ACTAGCCTTT
GGTTTAGCAG CATCAAGTAT CTTCCCAGCA TTAATGATGG GTATATTCTC TAAGAAAATG
AGTGGTACAG CAGCAATTTC AGGTATGGTT GCAGGTATCG GTGTAACAAT GATGTATGTG
TTCCAACACA AAGGCATTAT GTTTATTCCA GGTACTTCAT TCCTAGGTGA CATGGGTAAA
GATTGGTTCT TTGGAATCTC TCCTAACGCT TTTGGTGCCG TTGGTGCAAT AGTTAACTTT
GGTGTCGCTT TCATCGTTCT TCAGTTTACT GGACCATGTC CAGCTAATAT TGTCGCTATG
GTAGAAAACA TGCGTGCTCC AGGTGACTGT GCTGCAGCAC ACGATCACTA G
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| Protein sequence | MDELKLYTYI AVFSTFALYF AIAWWARAGS TSDFYVAGGG ITPMQNGMAI GADWMSAASF
ISMAGLIAFL GYGGSVFLMG WTGGYVLLAM LLAPYMRKHG KFTVPEFIFD RYYSKTARIV
AVACLIIASL TYIIGQMKGV GVAFSRFLEV DYGLGLGIGM FVVWVYAVLG GMKGITYTQI
AQYVVMIFAY TIPAIFISLQ LTGNPIPQLG LGSTLADGSG VYLLDKLDMV VTDLGFKEYT
TSNLGGTLNM FAYTISLMIG TAGLPHVIMR FFTVPSVQAA RQSAGYALVF IGLLYTVAPA
VGAMARLNLM NTIEPTAGQN LVYDERPQWF KDWEKTGLLK FEDKNGDGKI QYTSNATDQT
VTKINTMTGK EIVVVPNEMV KVDRDIMVLA NPAIANLPNW VIALVAAGGL AAALSTAAGL
LLAISSSISH DLMKGVLTPD LSEKNELLAG RVVMTIAILV SGYLGLHPPG FAAGTVALAF
GLAASSIFPA LMMGIFSKKM SGTAAISGMV AGIGVTMMYV FQHKGIMFIP GTSFLGDMGK
DWFFGISPNA FGAVGAIVNF GVAFIVLQFT GPCPANIVAM VENMRAPGDC AAAHDH
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