| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4914 |
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| Symbol | |
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| ID | 3520403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5204240 |
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| End bp | 5205535 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637287353 |
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| Product | C4-dicarboxylate transporter family protein, DctM subunit |
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| Protein accession | YP_271553 |
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| Protein GI | 71279940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATGTCA TTACCTTTAC TTTAGTTTTT GTGATGATTG TATTGCTGTT TCTAAGTTTC
CCTATGGTAG TGCCATTATC GGTGGGAGCA CTTATTGGTC TGGTCCATTT TTCTAGCATA
GACACTGGTG TGATAATACA GCAGATGGTT ACTGGCATAT CACCAAATGC CTTAATTGCT
GTGCCTATGT TTATTCTAGC TGCAGACATA ATGACTCGGG GACATACCGC GCACAATCTT
TTAGGTTTAA TTGAATCATT CGTTGGCCAT CTACGTGGCG GCCTACCAAT AACCGCTTGT
ATTAGTTGTA CTTTGTTTGG ATCTGTTTCA GGTTCAACCC AAGCAACGGT TGTATCTGTC
GGCCAGATCA TGCGTCCTAA ATTGCTCCAA GCGGGCTATA AAGATAGTTT CGTCATGGCT
TTAATCATCA ATGCCAGCGA TATTGCCTTT TTGATCCCAC CGAGCATAGG TTTGATCTTG
TACGGAACAC TAGCAAATAC CAGTGTTGGT GAGTTGTTTA TTGCGGGGAT CGGTCCGGGA
GTTTTACTTG CGGTCATGTT TTCTGCGTAT TGTTATTTTT ATACCGTTTA CCAAGGCGAT
AGCATTACGC TGGTAAAAAA ATCAACCATG GCAGAGAAGC TAGTCGCCAT CAAAAAGTCA
CTGTTACCGC TTGGTTTCCC GACATTGATT GTCGGAGGAA TATACTCTGG GGCGGTAACG
CCGACTGAAG CGGCCTCATT CTCTGTGCTC TATGCGATTA TCCTCGAGTG TTTTATTTAT
CGAGAGTTAA AGTATAAAGA TGTTATTGAT GCGGCGTTAA GCACTGGCTT GATCACAGCG
GTAGTTTTTA TTCTTGTTGG TATGGGACAG GCCTTTTCAT GGTATATCTC ATTTGAACAA
ATTCCGATGG AACTCTTAGC GCCACTAGAC TTAGAGGGTG CCTCTAAAGA ATATGTATTG
TTCGTAATAG CCCTATCCTT TTTTGTTGGT TGTATGTTTG TTGACTCGTT AGTGGTCTTG
GTTATTTTGA CCCCTATTTT TGTACCGATA GTCACCGCGG TTGGGCTTGA CCCTGTATTG
GTAGGTGTGA TGATCACCCT TCAAATGGCC GTTGGCTCGG CAACACCACC TTTTGGTTGT
GACATTTTTA CCGCGATAGC AATCTTTAAT AAGCCGTATT TGGAAGTAAT ACGAGGGACC
TTACCCTTTA TTTTGATCCT CTTTATGATG TCGGCTTTGT TAATCTATTT CCCGGAAATA
GCCTTATTCT TACGTGACCA AGCTTTTGCC AAATAA
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| Protein sequence | MYVITFTLVF VMIVLLFLSF PMVVPLSVGA LIGLVHFSSI DTGVIIQQMV TGISPNALIA
VPMFILAADI MTRGHTAHNL LGLIESFVGH LRGGLPITAC ISCTLFGSVS GSTQATVVSV
GQIMRPKLLQ AGYKDSFVMA LIINASDIAF LIPPSIGLIL YGTLANTSVG ELFIAGIGPG
VLLAVMFSAY CYFYTVYQGD SITLVKKSTM AEKLVAIKKS LLPLGFPTLI VGGIYSGAVT
PTEAASFSVL YAIILECFIY RELKYKDVID AALSTGLITA VVFILVGMGQ AFSWYISFEQ
IPMELLAPLD LEGASKEYVL FVIALSFFVG CMFVDSLVVL VILTPIFVPI VTAVGLDPVL
VGVMITLQMA VGSATPPFGC DIFTAIAIFN KPYLEVIRGT LPFILILFMM SALLIYFPEI
ALFLRDQAFA K
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