Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4881 |
Symbol | |
ID | 3519040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 5176325 |
End bp | 5177572 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637287320 |
Product | NADP-dependent malic enzyme, truncated |
Protein accession | YP_271520 |
Protein GI | 71278355 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.160981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGATT TTAAACAAGC AGCACTGGAT TATCACGCCT TGCCAACGGC TGGGAAAATT GCCATTGCTA TCACAACACC CGCCGAAACC AGTGCTGATT TATCGCTCGC TTATAGTCCT GGAGTCGCTG AACCTTGTCG AGAAATAGCC AAAAATCCTG ATGATGTCTA TAAATACACA GGTAAAGGTA ATACCGTTGC CGTTATCTCA AACGGTACTG CTGTTTTAGG TTTAGGTAAT TTAGGGCCAA TGGCCTCTAA GCCAGTAATG GAGGGTAAAG CATTATTGTT TAAACGCTTT GCTGACATTA ATTCATTCGA TATTGAAGTA ACGCATAGAA CACCTGAAGA GTTCATCAAT ACGGTCGCTG CTATCGCGGA TAGTTTTGGT GGTATTAACT TAGAAGATAT CAAAGCACCT GAGTGTTTTA TAATTGAAAA AGCACTAAAT GAGCGTTGTA AAATACCGGT GTTTCATGAT GACCAGCACG GGACTGCTAT CGTGACGGCG GCTGCCATGA TTAATGCCTT AGAAATACAA AATAAGAAAA TTGAACAAGC TGATATCGTT TGTTTAGGTG CCGGTGCGGC TGCGATTGCC TGTATGGAGT TGCTGATCCA ATGTGGCGCA ATTCGTGAAA AAATATATAT GCTCGACACG AAAGGGGTTA TCCATACTCG CCGTGATGAT TTATCTGAAT ATAAAACCCG TTTTGCCAAT AACACCGACA AACGAACTTT AGATGATGTT ATTGAAGGCG CTGATGTTTT TCTTGGTGTT TCTGGCCCTA ACTTGCTTAA CACAGAGCAG TTAAAGAAAA TGGCAGACAA CCCAGTTGTG TTTGCGTGTT CTAACCCAGA TCCTGAAATA AAACCTGAAC TAGCACACAG TGTTAGAAGT GATTTAATTA TGGCGACCGG TCGCTCTGAT TATCCAAATC AAGTGAACAA TGTTCTATGT TTCCCCTTTA TTTTCCGCGG TGCTTTAGAT GTACGAGCGC GTAAGATTAA TAACGAAATG AAAATAGCTG CGGTCCATGC AATTAGAGAA CTAGCCAAGC AAGACGTGCC GAAAAGTGTT TTAAAAGCAA GTAATGAAAA GGAATTGTCC TTTGGGAAAG GTTACATCAT TCCTCGCCCA ATGGATCCAA GGTTATGCAA AAATGTTGCC TTAGCAGTTG CTAAAGCTGC GGTTGATTCA GGCGTTGCTG CTTTACCTTT GCCTGATAAC TATATGAATG ATACTTAA
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Protein sequence | MSDFKQAALD YHALPTAGKI AIAITTPAET SADLSLAYSP GVAEPCREIA KNPDDVYKYT GKGNTVAVIS NGTAVLGLGN LGPMASKPVM EGKALLFKRF ADINSFDIEV THRTPEEFIN TVAAIADSFG GINLEDIKAP ECFIIEKALN ERCKIPVFHD DQHGTAIVTA AAMINALEIQ NKKIEQADIV CLGAGAAAIA CMELLIQCGA IREKIYMLDT KGVIHTRRDD LSEYKTRFAN NTDKRTLDDV IEGADVFLGV SGPNLLNTEQ LKKMADNPVV FACSNPDPEI KPELAHSVRS DLIMATGRSD YPNQVNNVLC FPFIFRGALD VRARKINNEM KIAAVHAIRE LAKQDVPKSV LKASNEKELS FGKGYIIPRP MDPRLCKNVA LAVAKAAVDS GVAALPLPDN YMNDT
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