| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4764 |
|---|
| Symbol | tuf1 |
|---|
| ID | 3521623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 5042153 |
|---|
| End bp | 5043337 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637287203 |
|---|
| Product | elongation factor Tu |
|---|
| Protein accession | YP_271408 |
|---|
| Protein GI | 71281152 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0050] GTPases - translation elongation factors |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG AAAAATTTGA ACGTAATAAA CCGCATGTTA ACGTTGGTAC TATCGGTCAC
GTAGATCACG GTAAAACAAC TTTAACAGCT GCTATCTCTG CTGTATTAAC TAAAGTTCAC
GGTGGTGAAG TTAAAGATTT CGCACAAATC GATAACGCTC CTGAAGAACG TGAACGTGGT
ATTACAATTA ATACTTCTCA CATCGAATAC GATACTGAAG CACGTCACTA TGCACACGTA
GATTGTCCTG GTCACGCCGA TTATATCAAA AATATGATCA CTGGTGCTGC ACAAATGGAT
GGCGCTATCT TAGTAGTTGC TGCTACAGAT GGTCCTATGC CACAAACACG TGAGCACATC
TTATTGTCTC GCCAAGTTGG TGTTCCTTTC ATCATCGTTT TCATGAACAA ATGTGACGTT
GTAGATGATG AAGAATTATT AGAATTAGTA GAAATGGAAG TTCGTGAACT TCTTTCTGAA
TATGACTTCC CTGGTGATGA TTTACCAGTA ATTCAAGGTT CAGCTTTAGG CGCTCTTCAA
GGCGATGAAG CATGGGAAGC GAAAATTATC GAACTTGCTG ATGCACTTGA TACTTACATT
CCAGAGCCAG AGCGTGCAAT TGACGGTGCA TTCATCATGC CTATCGAAGA TGTATTCTCA
ATCTCAGGTC GTGGTACAGT TGTAACAGGT CGTGTTGAAC GTGGTATCAT CAAAATTGGT
GAAGAAGTAG AAGTTGTTGG TATCCGTGAT ACACAAAAAT CAACTTGTAC AGGTGTTGAA
ATGTTCCGTA AGCTTCTTGA CGAAGGTCGT GCTGGCGAGA ACTGTGGTGT TCTTCTACGT
GGTCTTAAGC GTGAAGATGT TGAACGTGGT CAAGTACTTT GTGCTCCAGG TTCAATCTTA
CCTCACACTA AATTCGAATC AGAAGTTTAT GTTCTTTCTA AAGATGAAGG TGGTCGTCAT
ACTCCATTCT TTAAAGGATA CCGTCCACAG TTTTACTTCC GTACAACAGA TATCACAGGT
GCTGTAGAGC TTCCTGAAGG TGTTGAAATG GTAATGCCTG GTGACAACCT TAAGTTTGTT
GTTGAGCTAA TCAACCCAGT AGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGTCGTACTG TTGGTGCTGG TGTTGTTTCT AAGATTATGG CTTAA
|
|---|
| Protein sequence | MAKEKFERNK PHVNVGTIGH VDHGKTTLTA AISAVLTKVH GGEVKDFAQI DNAPEERERG
ITINTSHIEY DTEARHYAHV DCPGHADYIK NMITGAAQMD GAILVVAATD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDV VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALGALQ
GDEAWEAKII ELADALDTYI PEPERAIDGA FIMPIEDVFS ISGRGTVVTG RVERGIIKIG
EEVEVVGIRD TQKSTCTGVE MFRKLLDEGR AGENCGVLLR GLKREDVERG QVLCAPGSIL
PHTKFESEVY VLSKDEGGRH TPFFKGYRPQ FYFRTTDITG AVELPEGVEM VMPGDNLKFV
VELINPVAMD EGLRFAIREG GRTVGAGVVS KIMA
|
|---|
| |