| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4762 |
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| Symbol | |
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| ID | 3522872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 5039598 |
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| End bp | 5040701 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637287201 |
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| Product | TonB domain-containing protein |
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| Protein accession | YP_271406 |
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| Protein GI | 71282398 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCAA CATGGGTAGG TTTATCTTTA GCAATACTTA TAACAGTATC CTTCAGCGCA
AGGGCTAAAC AAGAAGTAAC CTTGAATAGC CAGTTTAAAA CTGCCTACTT TTCATATCAG
GGGGCGGTAA AGAATAATGA TGCAGACTCC CAATTTAAAT ATGCCACTGA AGCTTATCAA
TTAGGCAGTA AGTTCTATGG TACTGCAAAT ATCAACACCG CAAACTTAGC GCTAATATTA
GCCCGACTGC ATCTTGATAA AAATCAAAAA GAGCAAGCAA CGTCATTACT TCTTAATACT
TTGAATGCTT TCAAAGTTGA ATATGGGGAT AGTGCAATAG ATCTTGCTGA AATATATATC
CTCTTAGGTC TATCTCTAAA TTACGATCAA AGAAAGAAGT CTATTAATTA TCATCTAAAA
GCATTAAGCA TTGCTGAAGA GCATGCAGCA GAGCATGCAG CAGAGCACCC ATTTATCAAT
GCTCAAATTC AATTAGAAGC CGGTATAGCA CTACTTCGCC TAGGCTCTAG TAAAAGTAAC
GCTATTCTAA CCGCACAAGA GTTTTTTAAA GATAAGCTAT CTTCAAATGA TAAACGAGTT
ATCGAGTCTA ATTTTTATGC GGGGAAATAC TACTTAACTC GAAGAAAATA TAGTAAATCG
GTTGATTACT TCGAAAGCAA CTTACCAGTA TTTAAAGCGC TGGAAGGAGC AACTCATCCT
TTAGAGCTAA ATACACATGC ATTTTTAATC AATGCGCTAG AGAAAAGTGG TAAAAGTGAT
GAAGCTACCA ACCATTGTAT TGCCATTGGC TCAATGACAC CATGGGATGA CAGTCAAGAG
CCAATACCTT TATTTAGAGT TGAGCCTATA TACCCTGTTG ATTATGCTCG CAGAGGAAAA
TCGGGTTATG TAATAATAGG TTTTACTATT TCTGATTTTG GAACGGTGTT AGATACAAAA
GTATTAGAAT CTATAGGTGG GAAACAATTT GAGAGGACCG CTTTAGCAGC ACTAAATAAT
TGGCGTTACG CACCTAAATT TGAAGATGGA AAACCTGTTG AAAAATACGC CACGGTACAA
TTAGACTTTA AAATTCGTAA ATAA
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| Protein sequence | MNATWVGLSL AILITVSFSA RAKQEVTLNS QFKTAYFSYQ GAVKNNDADS QFKYATEAYQ
LGSKFYGTAN INTANLALIL ARLHLDKNQK EQATSLLLNT LNAFKVEYGD SAIDLAEIYI
LLGLSLNYDQ RKKSINYHLK ALSIAEEHAA EHAAEHPFIN AQIQLEAGIA LLRLGSSKSN
AILTAQEFFK DKLSSNDKRV IESNFYAGKY YLTRRKYSKS VDYFESNLPV FKALEGATHP
LELNTHAFLI NALEKSGKSD EATNHCIAIG SMTPWDDSQE PIPLFRVEPI YPVDYARRGK
SGYVIIGFTI SDFGTVLDTK VLESIGGKQF ERTALAALNN WRYAPKFEDG KPVEKYATVQ
LDFKIRK
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