Gene CPS_4758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4758 
Symbol 
ID3523337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp5033660 
End bp5034313 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content40% 
IMG OID637287197 
Producttransglycosylase SLT domain-containing protein 
Protein accessionYP_271402 
Protein GI71277833 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAT TTTCAAGGGA ACAATTTCAA TGTTGCCGCT TAGGTTTGTT CCTAATTTTA 
GCTACGTCTG TAATCGTCAG TTACGCTTTT GAAAAAAAAA CAGCAAATAT TTACACCTAT
AAATCAACCT CAGGGGTAAC GTCTTTCTCT GATATCGAAC CACTTGATGT TGATTTTAGT
CGTTATCGAT TTGATTGTTA TGCCTGCGAA GTTGATTCAT TAATTGACTG GCGTAAAGCA
ACCCTTTATT TACAGCCTTA TAAGAATGAT ATAAATAAAG CTGCGTTGAA ATATGATATT
GACCCTGCTT TTGTTCGAGC GGTTATTCAC GCAGAGTCTC ATTTTAATCC CCAAGCTGTG
TCGAAGCAGG GCGCGCAAGG TTTGATGCAG TTAATGCCTG CAACAGCGAA AGAGCTTGGC
GTACGGAATT CGTTAAGTGC CCAGCAGAAT ATTAAGGGAG GCGTTAAACA TTTAGCACGC
CTACTCAGAA AATATAAGGG TGATAATAAA TTAGCTTCAG CAGCTTATAA TGCAGGGGAA
GGCGCAGTTA AACGTCACGG AGGTATTCCG CCCTATAAAG AAACCCAAGT GTATGTAGAG
CGGGTCGGTA TTTTACACCA GCGTTATGGA CGCTTTTCTC ACCTTAATAA ATAA
 
Protein sequence
MRRFSREQFQ CCRLGLFLIL ATSVIVSYAF EKKTANIYTY KSTSGVTSFS DIEPLDVDFS 
RYRFDCYACE VDSLIDWRKA TLYLQPYKND INKAALKYDI DPAFVRAVIH AESHFNPQAV
SKQGAQGLMQ LMPATAKELG VRNSLSAQQN IKGGVKHLAR LLRKYKGDNK LASAAYNAGE
GAVKRHGGIP PYKETQVYVE RVGILHQRYG RFSHLNK