Gene CPS_4741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4741 
Symbol 
ID3520189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand- 
Start bp5020307 
End bp5020966 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content41% 
IMG OID637287180 
Producthypothetical protein 
Protein accessionYP_271385 
Protein GI71279728 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACT TTTTATTTTA TTTAGATATT TTTGGCGTCA TTGTTTTTGC CTTATCAGGG 
GCGCTTATGG CTGGGCGTTA TCAACTTGAT CCTTTTGGTG TTGTGGTGTT GGCTTCAGTT 
ACTGCTGTGG GTGGCGGTAC CATTCGAGAT GTTATTTTAC AAACGCCCGT CTTTTGGGTG 
GAAAAACCCT ACTACCTCTA TGTTATTTTA GCGACTGCAA TACTCACCAT AGTGCTTATT 
AGACAACCAA AACGGATCCC TAAGCGTTTC TTGCTCATTG CTGATGCACT AGGTTTAGCT 
TTGTTTGCGG TTTTAGGCAC GCAAAAAGCA TTATATTTGG GCGCACCAAT TCCGGTGGCT 
GTGGTATTAG GTACTATTAC GGGGATTGCC GGCGGAATGA TTCGAGATGT TTTATGTAAT 
GTAATCCCGA TGATTTTACG TGAAGAGATT TATGCGCTGG CGGCCATGTT AGGTGGTAGT 
TTATTTATTA TATTGCATGG ATTAAATTGG AATGATACCA ATGCGATGAT TGTGTCAATC 
TCTGCAGCAT TGGCTCTACG CCTAGCCGCT ATCTATTGGC ATGTTTCATT ACCGGCCTTT 
CATATTGTTG AAAAGCCAAA AAAAGAAAAA GGCACAACTA AGATCATAGA GAAAAAATAA
 
Protein sequence
MNDFLFYLDI FGVIVFALSG ALMAGRYQLD PFGVVVLASV TAVGGGTIRD VILQTPVFWV 
EKPYYLYVIL ATAILTIVLI RQPKRIPKRF LLIADALGLA LFAVLGTQKA LYLGAPIPVA 
VVLGTITGIA GGMIRDVLCN VIPMILREEI YALAAMLGGS LFIILHGLNW NDTNAMIVSI 
SAALALRLAA IYWHVSLPAF HIVEKPKKEK GTTKIIEKK