| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4716 |
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| Symbol | ahpF |
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| ID | 3522330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4991903 |
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| End bp | 4993474 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637287155 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_271360 |
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| Protein GI | 71281858 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGACA CAAACTTACA AACACAATTA AAAAGTTATT TAGACAACTT AAAAACACCA
GTCGAGCTAA TCACCTTTAC TGATGAAAGC CCTAAGGCAA AAGAACTTGC TCAATTAGTG
ACACAAATCG CTGAATTATC ACCATTAATC ACTGAAATTA ATGGTAATAA TAGTGAACAA
GCGGCCAACG AACGCGTGCC ATCTATGTTA GTCCGTAGTG TGGCGAGTAA TAGCGAAATG
CGTTTTGCAG GTTTACCAAT GGGGCACGAA TTTACCTCAT TAGTCATGGC GTTATTACAC
AGTGGTTCAC ACCCTTTAAA AATTGAAGCT GAGCAAATAG AACAAGTACG CAACCTCGAA
GGGGATTTTG TTTTTGAGAC CTACATCTCG TTAAGCTGTC AGAATTGTCC GGATGTAGTA
CAAGCCTTAA ATATGATGGC AGCCATTAAC CCGAATATAA AACACACCAT GATTGACGGT
TCGTTATTTC AAACGGAAGT GTTTGATCGT GATGTGATGG CAGTCCCCAG TGTGTATTTA
AATGGTGAGT CATTTAGTCA GGGTCGTGTG TCATTAACCG ATATTTTAAA TAAAGTAGAT
ACCAATGCGG GTGCTCGCCA AGCTAAAGCA TTAGAGAATA AAGATACCTA TGACTTTTTA
GTTGTCGGTG GTGGGCCTGC AGGTGCCGCC GCCGCAATTT ATGCGGCACG AAAAGGTATT
AATACTGGCT TAGTTGCAGA CCGATTTGGC GGACAGGTCA GTGATACCAT GGCGATTGAA
AACTTTATCT CGGTCAAAGC CACACAAGGG CCAAAACTTG TTGCTAGTTT AGAAGAACAT
GTTCGTGAAT ATGATGTAGA TATCATGAAC AGTAATAAAG CGAGTAAAGT GAAGCGCAAT
GAAGCTACAG GACTGGTTGA AGTTAGCTTA GAAAATGGCG CCGTATTAAA AAGTAAGTCG
GTGGTATTAG CAACTGGCGC ACGCTGGAGA GAAATGAATG TACCGGGTGA AAATCAGTAT
CGCGGCAAAG GGGTTGCTTA CTGTCCTCAT TGTGACGGAC CACTCTTTAA AGGCAAACCC
GTAGCGGTTA TTGGTGGTGG TAATTCAGGT ATTGAAGCTG CCATTGATTT AGCCGGTATT
GTAGAGCATG TCACTGTTTT AGAATTTGCA GACACGCTAC GTGCAGATGA TATTTTGGTG
AGAAAAGCTA ATTCATTAAC TAACGTCACT ATTATTACTA ATGCGCAAAC CACTGAAGTG
CATGGTGATG GTACACGTGT CACTAGCTTA AGTTACACCG ACCGAGGTAC AGGTGAACAT
CATTCACTGG CATTGGCAGG TATTTTTGTG CAAATAGGCT TGATGCCAAA CACTGAGTTT
TTACAAGGTG AAATAGAATT AACTAATCGC GGTGAAATTA TTGCAGGTAG CCGAGGTGAG
ACGTCTATTA CAGGGGTTTT TGCAGCAGGC GATGTAACCA ACAACCCTTA TAAACAAATT
ATTATTGCGA TGGGAAGTGG TGCAAATGCT GCTTTGGGAG CTTTTGATTA CCTTATTCGT
CAAGACGTTT AA
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| Protein sequence | MLDTNLQTQL KSYLDNLKTP VELITFTDES PKAKELAQLV TQIAELSPLI TEINGNNSEQ
AANERVPSML VRSVASNSEM RFAGLPMGHE FTSLVMALLH SGSHPLKIEA EQIEQVRNLE
GDFVFETYIS LSCQNCPDVV QALNMMAAIN PNIKHTMIDG SLFQTEVFDR DVMAVPSVYL
NGESFSQGRV SLTDILNKVD TNAGARQAKA LENKDTYDFL VVGGGPAGAA AAIYAARKGI
NTGLVADRFG GQVSDTMAIE NFISVKATQG PKLVASLEEH VREYDVDIMN SNKASKVKRN
EATGLVEVSL ENGAVLKSKS VVLATGARWR EMNVPGENQY RGKGVAYCPH CDGPLFKGKP
VAVIGGGNSG IEAAIDLAGI VEHVTVLEFA DTLRADDILV RKANSLTNVT IITNAQTTEV
HGDGTRVTSL SYTDRGTGEH HSLALAGIFV QIGLMPNTEF LQGEIELTNR GEIIAGSRGE
TSITGVFAAG DVTNNPYKQI IIAMGSGANA ALGAFDYLIR QDV
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