Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4597 |
Symbol | ompR |
ID | 3519604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4852684 |
End bp | 4853406 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637287036 |
Product | osmolarity response regulator |
Protein accession | YP_271244 |
Protein GI | 71277926 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAG AAACACCTAA AATTTTAGTA GTAGATGATG ATATGCGTTT ACGCTCATTA TTAGAGCGTT ATTTAGTTGA ACAAGGTTTT ACGGTTCGAA GTGCGGCTAA TTCAGAACAA ATGGATCGTC TGCTTGAACG TGAAAACTTT CATTTGTTAG TACTTGATTT AATGTTACCC GGCGAAGATG GTTTATCAAT TTGTCGTCGC TTACGTCAGA ATTCCAATAA CATTCCGATT GTGATGTTAA CAGCGAAAGG TGATGAAGTT GACCGTATTA TTGGCCTAGA GCTAGGTGCA GATGATTATA TGCCCAAGCC TTTCAACCCT AGAGAGTTAC TTGCCCGTAT TAAAGCCGTA TTACGTCGTC GTACTCAAGA AGCTCCGGGA GCACCTGCAC TAGAAGAAAA TGTTATTAGT TTTGGTGGCT ACCATTTAAA TTTAGCTACT CGTGAAATGC AAAAAGACGA TATTAGTATG CCGTTAACCA GTGGCGAATT TGCTGTACTT AAGGCATTAG TTACCCATCC GAGAGAGCCA TTATCACGTG ATAAATTGAT GAACCTTGCA CGTGGTAGAG ATTACTCAGC ATTGGAGCGT AGTATAGATG TGCAAGTATC TCGCTTACGT CGAATGCTTG AAGAGGATCC TGCTAAGCCA AGATACTTAC AAACGGTTTG GGGCTTAGGT TATGTCTTTG TGCCTGATGG TAGCCCAGCT TAG
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Protein sequence | MTQETPKILV VDDDMRLRSL LERYLVEQGF TVRSAANSEQ MDRLLERENF HLLVLDLMLP GEDGLSICRR LRQNSNNIPI VMLTAKGDEV DRIIGLELGA DDYMPKPFNP RELLARIKAV LRRRTQEAPG APALEENVIS FGGYHLNLAT REMQKDDISM PLTSGEFAVL KALVTHPREP LSRDKLMNLA RGRDYSALER SIDVQVSRLR RMLEEDPAKP RYLQTVWGLG YVFVPDGSPA
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