Gene CPS_4536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPS_4536 
Symbol 
ID3518616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameColwellia psychrerythraea 34H 
KingdomBacteria 
Replicon accessionNC_003910 
Strand
Start bp4788853 
End bp4789656 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content40% 
IMG OID637286976 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_271184 
Protein GI71277874 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTGAAA TTGAAAACCT GACCTTTAAA CGAGGTGAAC GGGTGATTTA TGACGATATC 
AGTTTGTCTA TTCCTAAAGG CAAAGTTACC GCTATTATGG GGCCGAGTGG TATTGGTAAA
ACGACATTAC TTCGCTTGAT TGGTGGCCAA ATAAAGCCTG AAAGTGGCAA TATATTTTTT
GCAGGCAGAA ATATCCCTTT GTTATCGCGC GCTGACTTAT ATGAAGTCCG TAAAGATATG
AGCATGCTCT TTCAAAGTGG TGCGTTATTC ACTGAAATGA GTGTTTACGA TAATATCGCC
TTCCCCATAA GAGAACATAC CCAATTATCT GAAGCCATCA TTGAAAAAAT TGTTTTGATG
AAACTTGAAG CTGTTGGTTT ACGAGGTGCA AGGCACTTAC AACCCAGTGA GCTTTCTGGA
GGAATGGCCC GTAGGGTAGC ACTAGCAAGA GCTATTGCAT TAGATCCTGA ACTCATTTTA
TACGATGAAC CTTTTGCTGG CCAAGACCCT ATTTCTATGG GAGTCATTGT CCGGTTAATA
CGTTCATTAA ATGATGCGCT GGGGTTAACC TCTATAGTGG TTTCACATGA TGTTCCTGAA
GTTATGAGCA TCGCAGATTA TATTTATATT GTTGCTGAAA AGAAAATTAT TGGCCACGGT
ACACCTGATC AAATACGCCA AGATAGCTCT GCTCTAGTAC AACAGTTTAT TCAAGGTGAA
GCTGATGGCG CGGTGCCTTT TCATTATGAA GCACCAGCTT ATAGTGATGA ACTCATTAAA
ATATCGTCAA AAAGAGTTAA TTAA
 
Protein sequence
MVEIENLTFK RGERVIYDDI SLSIPKGKVT AIMGPSGIGK TTLLRLIGGQ IKPESGNIFF 
AGRNIPLLSR ADLYEVRKDM SMLFQSGALF TEMSVYDNIA FPIREHTQLS EAIIEKIVLM
KLEAVGLRGA RHLQPSELSG GMARRVALAR AIALDPELIL YDEPFAGQDP ISMGVIVRLI
RSLNDALGLT SIVVSHDVPE VMSIADYIYI VAEKKIIGHG TPDQIRQDSS ALVQQFIQGE
ADGAVPFHYE APAYSDELIK ISSKRVN