| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4513 |
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| Symbol | ispB |
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| ID | 3518869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4760378 |
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| End bp | 4761361 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286953 |
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| Product | octaprenyl-diphosphate synthase |
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| Protein accession | YP_271161 |
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| Protein GI | 71278535 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA AAGACAGTAT TAAAGCAATA CAGGCATTAG CGCAAAGCGA TATGGCGGCA
GTAAATGATC TTATTTATGA TCAATTACAA TCTGATGTCG CACTCATTAA TCAACTCGGT
ATATATATTG TTAACGGTGG CGGCAAGCGT ATGCGCCCAA TGTTAACAGT GTTGGCGGCT
AGAGCATTCG CATACCAAGG TGACAAACAT TTGGAAATTG CGGCAATTAT TGAGTTTATT
CATACTGCAA CCTTACTCCA TGATGATGTC GTCGATGAGT CGAATATGCG TCGTGGCAGA
GAAACCGCTA ATGCTTTATT TGGTAATAGC GCCAGCGTAC TAGTCGGTGA TTTTCTTTAT
ACTCGCTCTT TCCAGATGAT GACTAAATTG GGTGATATGC GCATTATGGA TATTTTATCT
GAGGCCACTA ATATAGTTGC TGAAGGTGAA GTATTACAGT TAATGAACTG CAATGATGCA
AGCACCACCG AAGAAAGTTA TATGCAGGTC ATTTATTGTA AAACGGCGAA ATTGTTTGAA
GCCGCAACAC GCCTTGCTGC CGTTATAGCG AAGCAAGATG CTAAAATAGA GCAAGCCATG
GCAGACTATG GTAAGTATTT AGGTACTGCA TTCCAGTTAG TTGATGACAT TATGGATTAT
ACTGCTGATG CTAAAGAAAT GGGCAAAAAT GTCGGTGATG ATCTTGCTGA AGGTAAACCA
ACATTACCAT TATTATATGC TATGAAGCAC GGTAATGAGG CTCAACAGAA ATTAATTAAA
GAAGCTATTG AGCTTGGTAA TGGCATGGAT AACCTTGAGT TGATTCTTCA AGCGATGGAA
GAAACAGGTT CTTTACGTTA TACCCAGAAA CAAGCTGAAA TTGAAGCTGA TAAAGCCATC
AAGGCACTCA ACGTCATTGC TGATAGTGAA CACAAACAAG CGCTTATTTC TTTAGCACAT
ATAGCTGCTA ATCGAAGCCA TTAA
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| Protein sequence | MGNKDSIKAI QALAQSDMAA VNDLIYDQLQ SDVALINQLG IYIVNGGGKR MRPMLTVLAA
RAFAYQGDKH LEIAAIIEFI HTATLLHDDV VDESNMRRGR ETANALFGNS ASVLVGDFLY
TRSFQMMTKL GDMRIMDILS EATNIVAEGE VLQLMNCNDA STTEESYMQV IYCKTAKLFE
AATRLAAVIA KQDAKIEQAM ADYGKYLGTA FQLVDDIMDY TADAKEMGKN VGDDLAEGKP
TLPLLYAMKH GNEAQQKLIK EAIELGNGMD NLELILQAME ETGSLRYTQK QAEIEADKAI
KALNVIADSE HKQALISLAH IAANRSH
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