Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4454 |
Symbol | secA |
ID | 3522474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4690796 |
End bp | 4693477 |
Gene Length | 2682 bp |
Protein Length | 893 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286894 |
Product | preprotein translocase, SecA subunit |
Protein accession | YP_271102 |
Protein GI | 71282002 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGAA ATTTGTTAAC AAAAATGTTT GGTAGTCGAA ATGATAGATT ACTAAAACAA ATGAGCAAAG AAGTAACTAA AATAAATGCA CTTGAACCGG TATTAGAAGC GTTAAGTGAT GAAGAATTAA AAGCCAAAAC CACAGAGTTT AAGGAACGAT TTACTCAAGG CGAAACAGTA GAACAATTGT TAGTTGAAGC TTTTGCTGTC GTTAGAGAAG CCAGTAAACG AGTGTTTGGC ATGCGTCATT TCGATGTGCA AATGATTGGT GGCATGGTAC TAAATGAAGG CAAGATTGCC GAAATGCGTA CTGGTGAAGG TAAAACATTA ACGGCAACTT TGCCGTCATA CCTTAATGCG TTAACCGATA AAGGTGTTCA CGTTATTACT GTCAATGATT ACTTAGCTAC TCGTGATGCA GATTGGAGTC GTCCTTTATT TGAATTTCTT GGCTTAACTG TTGGCTGTAA TGTTGCCGGA ATGACAACTC AAGATAAACA AGCTGCCTAT CAATCAGATA TCACCTACGG CACAAATAAT GAATTTGGTT TTGATTATTT ACGTGACAAT ATGGTGTTCT CACCGCAAGA GCGCTCTCAA AAACCACTAC ACTTTGCCAT TATAGATGAA GTAGATTCAA TCCTAATTGA TGAAGCTAGA ACGCCACTGA TTATTTCAGG TCAAGCTGAA GATAGCTCTG CACTTTATAA GATAATTAAT ACTTTAGTAC CGACGCTTGA ACAGCAAGAA GAAGAAGATA AAGAAGGTGA AGAAAGCACG GGTGATTTCA CTATTGATGA AAAAGCCAAG CAAGTTTATT TAACAGAGCG TGGTCAAATT CATATTGAAG AGATCATGGT TGAAAAAGAG TTACTCACTG CGGGTGATAC TTTATTTTCA GCGGCCAATA TAACGTTATT ACACCATGTT ATGGCAGCAC TTCGTGCTCA TAAATTGTTT CAAAAAGATG TCGATTATAT CGTAAAAGAT GATGAGATAG TTATTGTCGA TGAGCATACG GGTCGAACAA TGGAAGGTCG ACGTTGGTCT GAAGGTCTCC ATCAGGCAGT AGAAGCCAAA GAAGGCGTTA ATATTCAAAA TGAAAATCAG ACGCTAGCTT CTATCACCTT TCAAAATTAT TTCAGAATTT ATGAAAAATT ATCTGGCATG ACCGGAACAG CAGATACAGA GGCTTTCGAA TTCAATCATA TCTATGGTCT AGAGACTGTT ATTATTCCTA CTAACCAGCC AATGGTTCGT AAAGATTTGT CTGATTTGAT TTACTTAACT ACAGAAGAAA AATTTGAAGC TATTTTAGCT GATATACAAG ATTGCGTGAA ACGAGGGCAG CCTGTTCTTG TCGGCACTAT TGCGATTGAA ACTTCTGAGT TCTTATCTGA TTTCTTGAAA AAAGCAAAAA TTAAGCACAA AGTACTTAAT GCTAAATTTC ATCAGCAAGA AGCTGAAATT GTCGCTGATG CAGGTAAAGA AAATGCAGTA ACAATAGCGA CTAATATGGC TGGCCGTGGT ACTGATATCG TTTTAGGTGG CAATTTAGAT GCCACTATCG CTAAATTAAC TAACCCTAGC GAAGATGATA TCGCTAAAGC TAAAGCGCAG TGGAAAATTG ACCATGAACG TGTACTTGAG TTGGGTGGTT TACATATAGT TGCTACAGAA CGTCATGAGT CTAGACGAAT CGATAATCAA CTTCGTGGAC GCTCAGGTCG ACAAGGTGAT GAAGGTTCAA CGCGTTTTTA CCTATCAATG GAAGATTCAT TGATGCGTAT ATTTGCCTCA GAACGTATTT CAAATATGAT GCGTAAGTTA GGCATGGAAA AGGGTGAGGC TATTGAGCAC CCTTGGGTTA CTCGTAGTAT TGAAAATGCA CAGCGTAAAG TTGAAGGTCG TAACTTTGAT ATGCGTAAGC AATTATTAGA ATATGATGAT GTTGCTAATG ATCAACGTGG TGTTATCTAT GAGCAACGTA ATGAGTTACT TGATAATGAA GAAATTGGTT CAGTTGTTGA AGCAATTCGC AGTGATGTGA TTAATGGTGT AATCGATCAG CACATTCCGC GTCAATCATT AGACGAAATG TGGGATATCG AAGGCCTTGA AGAACAATTA AAGGGTGAGT ATGCAACTGA ACTGACCATC GCTAAATGGC TTGAAGATGA TAGTAAACTT CATGAAGAAA GCTTGCGCGA AAAGATCATT ACTGAGTTTG AACAAGCTTA TAAAGATAAA GAAGAAGCTG TTGGCGTAGA TGTTTTACGT CAGTTTGAAA AAGCAGTGAT GTTACAAAGC TTAGATTCAC ATTGGAAAGA GCATTTATCA GCCATGGATC ACCTGCGTCA AGGTATCGGG TTACGAGCTC ACGCACAAAA GAATCCTAAA CAAGAATTCA AGCGTGAATC ATTTGAGTTA TTTACTGAAA TGTTAGATAA CTTAAAGTAT GACGTTGTAG GTATTTTATC TAAAGTACAA ATTCGTGCTG AGTCTGATGT TGAAGCGGTA GAAGAGCAGC ATAGAAAGTC TGAAGAAGTA CCAATGGATT TCCAGCACCA ATCAGCATCA AGCCCTAGTG AGCAAGCACA AACTCCTCGC GTGGGTCGTA ATGAACCTTG TCCATGTGGC TCAGGTAAAA AGTATAAACA ATGTCATGGC AAGCTTGCCT AG
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Protein sequence | MFGNLLTKMF GSRNDRLLKQ MSKEVTKINA LEPVLEALSD EELKAKTTEF KERFTQGETV EQLLVEAFAV VREASKRVFG MRHFDVQMIG GMVLNEGKIA EMRTGEGKTL TATLPSYLNA LTDKGVHVIT VNDYLATRDA DWSRPLFEFL GLTVGCNVAG MTTQDKQAAY QSDITYGTNN EFGFDYLRDN MVFSPQERSQ KPLHFAIIDE VDSILIDEAR TPLIISGQAE DSSALYKIIN TLVPTLEQQE EEDKEGEEST GDFTIDEKAK QVYLTERGQI HIEEIMVEKE LLTAGDTLFS AANITLLHHV MAALRAHKLF QKDVDYIVKD DEIVIVDEHT GRTMEGRRWS EGLHQAVEAK EGVNIQNENQ TLASITFQNY FRIYEKLSGM TGTADTEAFE FNHIYGLETV IIPTNQPMVR KDLSDLIYLT TEEKFEAILA DIQDCVKRGQ PVLVGTIAIE TSEFLSDFLK KAKIKHKVLN AKFHQQEAEI VADAGKENAV TIATNMAGRG TDIVLGGNLD ATIAKLTNPS EDDIAKAKAQ WKIDHERVLE LGGLHIVATE RHESRRIDNQ LRGRSGRQGD EGSTRFYLSM EDSLMRIFAS ERISNMMRKL GMEKGEAIEH PWVTRSIENA QRKVEGRNFD MRKQLLEYDD VANDQRGVIY EQRNELLDNE EIGSVVEAIR SDVINGVIDQ HIPRQSLDEM WDIEGLEEQL KGEYATELTI AKWLEDDSKL HEESLREKII TEFEQAYKDK EEAVGVDVLR QFEKAVMLQS LDSHWKEHLS AMDHLRQGIG LRAHAQKNPK QEFKRESFEL FTEMLDNLKY DVVGILSKVQ IRAESDVEAV EEQHRKSEEV PMDFQHQSAS SPSEQAQTPR VGRNEPCPCG SGKKYKQCHG KLA
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