| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4381 |
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| Symbol | psd |
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| ID | 3520166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 4616599 |
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| End bp | 4617492 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286822 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_271030 |
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| Protein GI | 71279706 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.706772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTTCAA AAAATAGTCT TAGCGATAAA ATTAAAATCA CCTTCCAGTA CATTATGCCT
AAACATGCTA TTTCACGTTT AGTTGGTAAG TTAGCCGCTG CAAAAATGGG TTGGTTAACC
ACTAAGCTGA TCAGTATGTT TATTAAAGCC TATGGCATTA ATATGAATGA AGCTAAGCTT
AAAAAGGCCA GTGACTTTGA TACCTTCAAT AACTTTTTCA CTCGCGAACT AGAAGAGGGT
GCTCGAATTA TTGATAATGA TGAGAATACA ATCTGTTATC CCGTTGATGG TGCAATCAGT
CAACAAGGCG ATATTATTGA TGGGCAACTT ATTCAAGCAA AAGGTTTCAA CTATAGTGTC
ACCTCCTTGC TCGGTGGTGA CGAAAAAACA GCAGCGCCTT TTCAAGGAGG GAAATTCTCT
TGTATTTACT TAGCACCAAA AGATTATCAC CGTATTCACA TGCCAATGGC AGCAACCTTA
CGTGAAATGA TTTATGTACC CGGTGAACTA TTTTCAGTTA ATCCATTAAC CGCTCAAAAT
GTACCCGACC TTTTCGCGAG AAATGAACGC GTAGTTGCCA TTTTTGATAC TGAAATGGGT
GAACTCGCCA TGGTATTAGT CGGTGCAACG ATTGTTGCCA GTATAGAAAC TACTTGGGCA
GGTACGATTA CGCCTCCTGC AGGAAAAGAC ATTTTTAGGT GGCAATATCC TAAAGACGGG
GCTGATGCGA TTACTTTTGA AAAAGGTGAT GAAATGGGTC GCTTTAAACT AGGATCGACA
GTTGTTAGTA CTTTCGCACC TAATATGATT AGTGAATTTG CAACCGATGC TGGCCCTGGT
ACTGTCACTC GACTTGGCGA AATCTACGCT GCACTAGATA AGAGTGCTTC ATAA
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| Protein sequence | MSSKNSLSDK IKITFQYIMP KHAISRLVGK LAAAKMGWLT TKLISMFIKA YGINMNEAKL
KKASDFDTFN NFFTRELEEG ARIIDNDENT ICYPVDGAIS QQGDIIDGQL IQAKGFNYSV
TSLLGGDEKT AAPFQGGKFS CIYLAPKDYH RIHMPMAATL REMIYVPGEL FSVNPLTAQN
VPDLFARNER VVAIFDTEMG ELAMVLVGAT IVASIETTWA GTITPPAGKD IFRWQYPKDG
ADAITFEKGD EMGRFKLGST VVSTFAPNMI SEFATDAGPG TVTRLGEIYA ALDKSAS
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