Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4234 |
Symbol | |
ID | 3520437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4458885 |
End bp | 4460711 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637286675 |
Product | hypothetical protein |
Protein accession | YP_270884 |
Protein GI | 71279974 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.66689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTAAAT CAATTTTTAA ATGGATAGGA CTCTCCCTAT TGTCTGTCAT AGTACTAGGG GGTGCATTTG CATCACACGA ATGGTACGCC GAAAAACCTT TTATGTTACG TTCATTTCTT GATAGAACTG TTTTACAACA AGCATTTGAA AGTCCGGAAA CGCTGACTTC ATTGGGTTTC TTGGAGTCTA TCGGCATTAC CGGACATAAC GCTGAGCTTG ATGATGATCG CCCAGAAAAG ACCGATGCTC TTTTTGCTGA AATGAAAAAA GTAAAAGAAA CACTGCTTAC CTATGATGAT AGTGACTTAG ATGAATCGCA GCTTTTATCT AAAGAAATAG CCATGTATTT ATTGGATATC TTATTAGTCT CTGAACCATA CCGATATCAC AATTATCCAG TGAACCAGTT GTTTGGTATT CAAAATGGTT ACCCTAGTTT TATGGATGCT CAACATCAGG TCAATTCAGT TGGTGATGCC GAGAACTATA TTGCTCGACT TAATAAAGTA AAAGTTAAGT TCTCCCAAAA TCTTGAAGGT TTAAAATTAC GGGAAGAAAA AGGCATTTTA CCTCCTCGTT TTGTTATTGA CCGTGTTCTT GAAGAAATGA CAGCGTTTGT AGCTAAGCCT GCTGAAGAAA ATATTCTCTA TTCATCATTA AAAGCGAAGT TATCCGATGC TGAAGATATT TCTCCTGCAG AGCAAACTAG ATTATTAAAC TTAGCTAAAG AGGAAATTAT TGCTTCGGTA CATCCTGCTT ATCAATTGCT TATAGATTAT TTTAATCAAG TCGCTGATAA ATCTACTACC GATGATGGCA TTTGGAAGCT ACCTGATGGT GATAAAGTTT ATGCTCAAGC GCTTAAGTTT TTCACTACTA CCGATTACAG CGCAGGTGAA ATTCATAATA TCGGTCTACA TGAAGTTGAT CGAATTCAGT TAGACATTTT GACCATTTTA GAAAAAGAAA ACTATGACGT TAGCCAAGGA TTCACTGCAG CAATTGAAAC CTTAGCTGCT CAAGATGAAT TCTATTACCC TGATACCAAA GCGGGTAGAG AACAAATATT AACGGATTAT CAAACCATTC TTGATGAAAT TAATGCGGGT TTAGAGTCGG CTTTTCGAAT TCGTCCAAAG GCGAGCATGA AGGTGCGGAG AATCCCTGAG TTCAAAGAAA AAACGGCTCC AGGAGCCTAT TATCAGCAAC CATCGATTGA TGGCAGTCGA CCGGGTATGT TCTTTGCTAA TTTATACGAT ATTAAAGCAA CACCGAAATA CAGCATGAGA ACCCTTGCTT ATCACGAAGG TATTCCAGGT CATCACTTTC AAATAGCTAT TGCGATGGAG TTAGAAGGTA TGCCTTTATT CCGTCGGATA TCACCCTTTA CCGCTTATAC AGAAGGTTGG GCGTTATATA CTGAGCGTTT AGCTTGGGAT TTAGGCTTTC AAGATGATCC TTTTGACAAT ATAGGTCGCT TACAAGCTGA ATTATTTCGT GCGGTACGTT TAGTGGTTGA TACCGGTATT CATCATAAAC GTTGGACTAG ACAAGAAGCG ATTGATTACA TGGTCGCTAA TACAGGTATG GCACATAGTG ATGTAGTTTC AGAAATTGAG CGCTACATCG TTATGCCGGG ACAAGCCACG TCTTATAAAA TAGGTTTGAT GAAAATCCTA GAGTTACGTA AGAAAGCTAA AGCCAGTTTA GGTGATAAGT TTGATTTACG AGATTTTCAT GATGTAGTTT TGAAAAACGG TGCTGTCCCT TTAGATATTT TAACCCGTTT AGTTGATCAA TATATTGCTG ATAAATCATC TAAGTAA
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Protein sequence | MVKSIFKWIG LSLLSVIVLG GAFASHEWYA EKPFMLRSFL DRTVLQQAFE SPETLTSLGF LESIGITGHN AELDDDRPEK TDALFAEMKK VKETLLTYDD SDLDESQLLS KEIAMYLLDI LLVSEPYRYH NYPVNQLFGI QNGYPSFMDA QHQVNSVGDA ENYIARLNKV KVKFSQNLEG LKLREEKGIL PPRFVIDRVL EEMTAFVAKP AEENILYSSL KAKLSDAEDI SPAEQTRLLN LAKEEIIASV HPAYQLLIDY FNQVADKSTT DDGIWKLPDG DKVYAQALKF FTTTDYSAGE IHNIGLHEVD RIQLDILTIL EKENYDVSQG FTAAIETLAA QDEFYYPDTK AGREQILTDY QTILDEINAG LESAFRIRPK ASMKVRRIPE FKEKTAPGAY YQQPSIDGSR PGMFFANLYD IKATPKYSMR TLAYHEGIPG HHFQIAIAME LEGMPLFRRI SPFTAYTEGW ALYTERLAWD LGFQDDPFDN IGRLQAELFR AVRLVVDTGI HHKRWTRQEA IDYMVANTGM AHSDVVSEIE RYIVMPGQAT SYKIGLMKIL ELRKKAKASL GDKFDLRDFH DVVLKNGAVP LDILTRLVDQ YIADKSSK
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