| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4213 |
|---|
| Symbol | |
|---|
| ID | 3519272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4435217 |
|---|
| End bp | 4437382 |
|---|
| Gene Length | 2166 bp |
|---|
| Protein Length | 721 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286654 |
|---|
| Product | putative ferric aerobactin receptor |
|---|
| Protein accession | YP_270863 |
|---|
| Protein GI | 71279226 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTTAA AAACATCCTT TACTCTATTG GCACTTATTA TCAGCGGCCA AGCACTCAGC
CAAGAAAATA AATCAGAACC AAATCAGACC CAACAAAAGT CTAAAGAACA AGACATTGAG
CGAATTATCG TTACCGGTAG TCGTATTGCA GAAAATATAG ATGAAGTACC TGCTTCAATA
ACCATAATCA CCCAAAAGCA AATTGCCGCA CAGCTAAAAG TTTCCTCAGA AATTCAAAGC
TTATTAGCGA ACCTTGTCCC TGGCATGGCA CCAAGTACAG GTTCATCGAG TAATTCAGGG
CAAACGCTTC GAGGGCGTTC TCCATTAGTG ATGATTGACG GTGTACCGCA ATCTACACCA
TTACGTAATG GCTCATTAGG TATCAGAACA CTCGACGCCA GCGTCATTGA ACGTATTGAA
GTAATTAAAG GTGCCACTTC CATTTATGGT AATGGTGCTG CAGGCGGTAT CATTAATTAC
ATCACTAAAA AAGCGAATAG TGATAAAGCA CTAAGCGGCC ATGCCAGTAT CTCTAGTCGC
TTTAGTGCCG TGGAAACAGA AGATTCAATA GGTCAGCGTT ATGAAGCTGG TATCAATGGA
GAGATAAATA ACTTCGATTA TGTTCTCAAT GCCAGCTACG AAGAAAATGG CTTACAACGC
GATGCTGACG GCGATATTTT AGGTTTGAAA TACGGTCTAT CTGATGCGGT GATGCAAGAT
TACTTTGCTA AAGTGGGTTA TCATTTTGAC GATGAAAAAT CATTACAGTT CACTTATAAC
TATTATGAAT CGAAGCAAGA TGTCGATTTA ATCGATCAAG TTGGCAATAT TAATACCGGC
GAAAAAACGC AAGCTATACC TGTACCCGAA GGCCAAACTG TCTTAGGTGA ACCGCAGGGC
CCAAGCAACC ATAATATGAT GCTTAAATAT GTTGATGATG AAGTATTCAA ACAAACACAG
TTGATGGTCG ACCTTTACAG CCAAGAAGTA GACAATACTT TCTTTTACTC GCCAGTACTC
GCTAATCCTG ATGCTGGTTA TGCCGGCGGA CAATCATTAA TAAATTCAGA TAAAAAGGGT
CTACGGGTAA CATTTAATAC ACTGGTTGAT TTCAGTTTTG ATAATGGTGA CTCACTTGAA
GCCACCTTCA TTTACGGCAT AGATGCCCTT AATGATGTCA CTTCTCAATC TATGGTGGAT
GGCAGAGTTT GGGTACCAGA AATGGATATG GAAAACCTCG CCGGTTTCTT GCAAACCAAG
TTAATTTATA ATAATGACCT TGTTATTAAG TTAGGTATCA GACAAGAAGA TATTGATTTA
ACGGTAAATG ATTACAGTAC GCTTAAGTTA TGTAAGAGTG CTGAACAATG CTCTGTTCCC
GTCGACGTCA CTGGAGATAC CTTAAATTAT AAAGCGACCA CCTACAATAT TGGAATCAAA
TATAATGCGC TGCCATTATT TAGTCCTTTT GTTAGTTACT CACAAGGCGC TGATATTTCT
GATACCGGTC GATTATTACG AACAGCAACA GTAACCGATA TTTCACTTAT TCGTACTGAA
GCTTCAATCA TCGATAATTA TGAATTAGGT TTCAGTTCTG ATTTTGAACA AGTGCATTTT
GAATTTGCGA CTTATTTTAG TACCTCTGAG CTAGGAACAA CCAATAAATT TAATGCAACT
ACGGGTGTCT ATATGCCAGT ACGCGCACCA CAAGAAATCT ATGGCTACGA AGCGTTGATT
AATTATAACA TTAACGATGC TTGGGCCGTA AATGCTACCT ATAGTTGGGT AGAAGGCAAA
AATACTGAAG CTGACGTTTA TTTAGGAGCA AAGCAGATCA GTCCACCTAA AGCGACAGTA
AATGTAAACT GGAATCCTAA TAGCGATATC AGCGTAGCGA TCAATTATTT ATATGTTGGC
GATCGTAAAC GCTTTGAACA GGTTGATGGC AAATTTGTGG GTGATCAAGG CCCTATTGAT
AGCTATCAGG TTGTTAATCT AAGCGGTAAT TATAATTTCG CGAGCGATTG GTCAGCATTT
ATTGGCGTTG AAAATTTATT TAACCAAGAT TACTACCCGA CAAAATCACA AGGTTACACC
TACGGTGGTT ACAACATCAA AGGTTTAGGA ACCACAGTGA ATATGGGCGT TAATTATCAA
TTCTAA
|
|---|
| Protein sequence | MVLKTSFTLL ALIISGQALS QENKSEPNQT QQKSKEQDIE RIIVTGSRIA ENIDEVPASI
TIITQKQIAA QLKVSSEIQS LLANLVPGMA PSTGSSSNSG QTLRGRSPLV MIDGVPQSTP
LRNGSLGIRT LDASVIERIE VIKGATSIYG NGAAGGIINY ITKKANSDKA LSGHASISSR
FSAVETEDSI GQRYEAGING EINNFDYVLN ASYEENGLQR DADGDILGLK YGLSDAVMQD
YFAKVGYHFD DEKSLQFTYN YYESKQDVDL IDQVGNINTG EKTQAIPVPE GQTVLGEPQG
PSNHNMMLKY VDDEVFKQTQ LMVDLYSQEV DNTFFYSPVL ANPDAGYAGG QSLINSDKKG
LRVTFNTLVD FSFDNGDSLE ATFIYGIDAL NDVTSQSMVD GRVWVPEMDM ENLAGFLQTK
LIYNNDLVIK LGIRQEDIDL TVNDYSTLKL CKSAEQCSVP VDVTGDTLNY KATTYNIGIK
YNALPLFSPF VSYSQGADIS DTGRLLRTAT VTDISLIRTE ASIIDNYELG FSSDFEQVHF
EFATYFSTSE LGTTNKFNAT TGVYMPVRAP QEIYGYEALI NYNINDAWAV NATYSWVEGK
NTEADVYLGA KQISPPKATV NVNWNPNSDI SVAINYLYVG DRKRFEQVDG KFVGDQGPID
SYQVVNLSGN YNFASDWSAF IGVENLFNQD YYPTKSQGYT YGGYNIKGLG TTVNMGVNYQ
F
|
|---|
| |