| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4180 |
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| Symbol | nudF |
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| ID | 3522430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4399811 |
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| End bp | 4400455 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637286622 |
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| Product | ADP-ribose pyrophosphatase |
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| Protein accession | YP_270831 |
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| Protein GI | 71281958 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGTA ATAAAAATAA GCCGGATGCT ATGCTGAAGT TTGATAATGA ACAGGTGTCT
GTGCACTCAG TGGTAACGAA ATATCAGGGC TTTTTTAAGA TGAATGAATA TTCACTGCAG
CATAAACTTT TTTCGGGAGA GCAAAGTCAG CTATTTACCC GAGAAGTTTT TGAACGTGGT
GATGCTGTGG TCGTCATGCC TTATGATGCA AAGCAAGATA AGGTGCTATT GATAGAGCAG
TTTAGACCTG GTGCTTTAAG AGGGGATGAC AGTCCTTGGT TATTAGAATT TATTGCGGGG
ATGTTTGACG AAAATGAAAC GCCAATAGAA GTCGCTATAA GAGAGGCCAA AGAGGAAACT
AATTTAACAC TTTGCCCTAA TGATTTAGTA CCTATGATGC AATATCTTTC TAGCCCTGGC
GGTATGAGTG AGCGGATTCA CCTATATTTA GCGCACTTTA ATAGTGATCT AGTAACGGAT
GGTGCTATTC ATGGTTTGCC TGAAGAAAAT GAAGATATTT TGTTACATAT TGTCAGTCGC
ACTCAAGCTT TGGCGCTATT GACCGATGGC AAAATCACTA ACGCAGCTAC TATTATCGGG
TTACAATGGC TGGCACTGAA CTATCAATCG TTATCGATTC AATAG
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| Protein sequence | MKSNKNKPDA MLKFDNEQVS VHSVVTKYQG FFKMNEYSLQ HKLFSGEQSQ LFTREVFERG
DAVVVMPYDA KQDKVLLIEQ FRPGALRGDD SPWLLEFIAG MFDENETPIE VAIREAKEET
NLTLCPNDLV PMMQYLSSPG GMSERIHLYL AHFNSDLVTD GAIHGLPEEN EDILLHIVSR
TQALALLTDG KITNAATIIG LQWLALNYQS LSIQ
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