Gene CPS_4148 details

Gene Information

• Locus tag: CPS_4148
• Symbol: mutY
• ID: 3522464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4362430
• End bp: 4363518
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637286591
• Product: A/G-specific adenine glycosylase
• Protein accession: YP_270802
• Protein GI: 71281992
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1194] A/G-specific DNA glycosylase
• TIGRFAM ID: [TIGR01084] A/G-specific adenine glycosylase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.220216
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATC CTATAGTAAT ATCAGCCAAA TCGGCTGAAC AATTTGGCCA GCAAGTCGTA 
AGCTGGTATC ACCTACAAGG TAGAAAGCAC TTACCTTGGC AACAAGATAA AACCCCATAT 
AGAGTGTGGA TTTCAGAGAT AATGTTACAA CAAACACAAG TTGCGACAGT TATCCCTTAC 
TATCAACGTT TTATGGAAAG TTTTCCGACA ATTACCGACT TAGCCAATGC TGATGAAGAT 
GTGGTTTTAC ATCATTGGAC TGGTTTAGGC TATTATGCTC GAGCTCGTAA TTTACATAAA 
TCAGCTAAAA TCATGCTCAA TGACTATGAT GGCCATTTTC CCATTGAAAT TGAGCAAGTT 
ATCGCTTTAC CTGGCATAGG TCGCTCGACC GCTGGCGCTA TTTTAAGTTT ATCGTTAAAA 
CAATATCATC CTATTTTAGA CGGTAATGTA AAACGGGTGC TGGCACGAAG TTACCTTGTT 
GAAGGTTATA ATGGCTTAAG TAAATTCGAT AAAGCGTTAT GGCAATTAAG TGAGAAATTA 
ACGCCTGCCA TTGAAACCGA TAGTTTTAAT CAAGCGATGA TGGATCTTGG GGCAACTGTG 
TGTACTCGTA GTAAACCAAG CTGTGATATA TGCCCCGTTG AGCAAAGTTG CCTAGCCAAA 
GCGGGTGATC AGCAAATGAA TTTTCCTCAG AAAAAACCTA AGAAAAAAAT TCCTGAAAAA 
CAAACAATCA TGGTGATCCC AAGATTGAAA AACGAAAACT GCGATAAAGT TTTAATGGAA 
AAGCGTCCTC CTGTTGGTAT TTGGGGCGGC TTATGGTGTT TTCATGAGGT TGATGAGCTA 
AGCGAAATTA ATGACTTAAT GACGAGTTTG TCACTTAAGG AAATTTCATC ACAAACCCTA 
ACTGAGTTTA GGCACACTTT CAGTCATTTT CATTTAGATA TTACTCCCGT GGTAGTAGAC 
TGCCAGCAAC TTGAAGTTTC AAAAATAAAC GAACCTAATC AGCAAAAGTG GTATGATTTA 
CACCAAGGAT TGAGTGTCGG CCTAGCGGCT TCCACACAAA AACTACTTAC TTTGCTTAGA 
GACTGTTAA 

 

Protein sequence

MNNPIVISAK SAEQFGQQVV SWYHLQGRKH LPWQQDKTPY RVWISEIMLQ QTQVATVIPY 
YQRFMESFPT ITDLANADED VVLHHWTGLG YYARARNLHK SAKIMLNDYD GHFPIEIEQV 
IALPGIGRST AGAILSLSLK QYHPILDGNV KRVLARSYLV EGYNGLSKFD KALWQLSEKL 
TPAIETDSFN QAMMDLGATV CTRSKPSCDI CPVEQSCLAK AGDQQMNFPQ KKPKKKIPEK 
QTIMVIPRLK NENCDKVLME KRPPVGIWGG LWCFHEVDEL SEINDLMTSL SLKEISSQTL 
TEFRHTFSHF HLDITPVVVD CQQLEVSKIN EPNQQKWYDL HQGLSVGLAA STQKLLTLLR 
DC