| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4119 |
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| Symbol | pdxJ |
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| ID | 3519304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4335517 |
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| End bp | 4336257 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637286562 |
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| Product | pyridoxine 5'-phosphate synthase |
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| Protein accession | YP_270774 |
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| Protein GI | 71279180 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0854] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00559] pyridoxine 5'-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.019832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGAAT TATTATTAGG TGTAAACGTT GACCATATTG CCACTTTAAG ACAGGCGCGT
GGTACTAATT ATCCTGACCC AGTTTATGCT GCAAGCGTTG CAGAGCATGC CGGAGCAGAT
GGTATTACTG TGCACCTGCG CGAAGATAGG CGTCATATCC AAGATAGAGA TATTCATGTT
TTAAAACAAA CATTACATAC TCGTATGAAC TTTGAAATGG CTGTCACTGA TGAAATGATA
GCGATAGCTT GTGATGTGAA ACCAGTATTT TGTTGTTTAG TTCCTGAGAA ACGCGAAGAG
TTGACTACTG AAGGTGGTTT AGATGTTGTA GGGCAGTTAG ATAAGATAAC TAAAGCAACA
GAGCAATTAA CAGCTGCAGG TATCGCTGTA AGTTTATTTA TTGATGCGGA TAAAGCACAA
ATTGATGCTG CGGTTGCCAG TAAAGCTCCT TATATAGAAA TACATACGGG ACATTATGCA
GATCTAAGCT CAGAAGAAGA GCAGCTGATA GAACTTGAGC GCCTAACTGT CGGTATTAAG
TATGCGCATA ACTTAGGATT AAAAGTTAAT GCAGGTCATG GTTTAAATTA TTTTAATGTC
AAACCTATTG CTGCTATTAA AGAAATTATC GAGTTGAATA TTGGCCATGC CATAATAGCG
CGTGCGGCTA TTGATGGCTT AGATAAAGCT GTTAGAGATA TGAAACAGCT GATGTTAGAA
GCAAGAACTT ATAATACTTA A
|
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| Protein sequence | MSELLLGVNV DHIATLRQAR GTNYPDPVYA ASVAEHAGAD GITVHLREDR RHIQDRDIHV
LKQTLHTRMN FEMAVTDEMI AIACDVKPVF CCLVPEKREE LTTEGGLDVV GQLDKITKAT
EQLTAAGIAV SLFIDADKAQ IDAAVASKAP YIEIHTGHYA DLSSEEEQLI ELERLTVGIK
YAHNLGLKVN AGHGLNYFNV KPIAAIKEII ELNIGHAIIA RAAIDGLDKA VRDMKQLMLE
ARTYNT
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