| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4104 |
|---|
| Symbol | tal |
|---|
| ID | 3521562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | + |
|---|
| Start bp | 4319112 |
|---|
| End bp | 4320074 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637286547 |
|---|
| Product | transaldolase B |
|---|
| Protein accession | YP_270759 |
|---|
| Protein GI | 71281093 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00874] transaldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.559408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAATT CTTCTTCACA GCTTGCACAA TTAAAACAAA TGACCACTGT TGTGGCTGAC
ACAGGTGATA TTGAGGCTAT TGCAAAATTT CAACCTCAAG ATGCGACAAC AAACCCATCG
CTTTTATTAA AAGCAGCTTC TTTACCTAAT TATCAAGGGT TAGTTAAAGA CTCTGTTGCA
TGGGCTAAAA CACAATCTGA CAATGCAGAA CAGCAAGTTA TAGATGCTGC AGATAAAATT
TCAGTATTAA TTGGCCTGGA AATTCTAAAA ATTGTCCCTG GTCGTATTTC TACTGAAGTG
GATGCTCGAT TATCTTTTGA TACCTCTGCA TCTATTACTA AAGCCCACAA ACTGATTGCT
ATGTATAACG AAGCAGGCAT TAGTAACGAT AGAATTTTAA TTAAACTTGC CTCTACTTGG
GAAGGAATTA AAGCAGCAGA ACAACTTGAG CAAGAAGGTA TTAACTGTAA CCTAACTTTG
TTATTTAGCT TTGCACAAGC ACGCGCATGT GCTGAAGCAG GCGCTTATTT AATATCTCCA
TTTGTTGGTC GTATTTTAGA TTGGTATAAA AAAGATACCG GTAGAAATGA CTATGCAAGT
AATGAAGACC CTGGTGTTGT TTCTGTTACC AGTATTTTTA ATTATTACAA GCTACAAGGT
TTTAACACCG TAGTAATGGG TGCCAGCTTT AGAAATATCG GCGAGATTCT TGAATTAGCC
GGCTGTGATC GTTTAACAAT CAGCCCACAG TTAATGGAAG AACTAGCAAA CAGCACAGAC
ACGGTAATCC AAAAGTTAAC GGCTTGTGAA GCTACGGCAG AAAAAGAAGC CGCTTTAAGC
CAAGCAGAGT TCCGCTGGCA GATGAATGAA GACCCAATGG CAACAGAGAA ACTTGCTGAA
GGTATTCGTA ACTTCACCAT TGATCAGGTC AAGCTTGAAA AGCAATTAAC AGATTTACTC
TAA
|
|---|
| Protein sequence | MTNSSSQLAQ LKQMTTVVAD TGDIEAIAKF QPQDATTNPS LLLKAASLPN YQGLVKDSVA
WAKTQSDNAE QQVIDAADKI SVLIGLEILK IVPGRISTEV DARLSFDTSA SITKAHKLIA
MYNEAGISND RILIKLASTW EGIKAAEQLE QEGINCNLTL LFSFAQARAC AEAGAYLISP
FVGRILDWYK KDTGRNDYAS NEDPGVVSVT SIFNYYKLQG FNTVVMGASF RNIGEILELA
GCDRLTISPQ LMEELANSTD TVIQKLTACE ATAEKEAALS QAEFRWQMNE DPMATEKLAE
GIRNFTIDQV KLEKQLTDLL
|
|---|
| |