Gene CPS_4061 details

Gene Information

• Locus tag: CPS_4061
• Symbol: ribA
• ID: 3522602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Colwellia psychrerythraea 34H
• Kingdom: Bacteria
• Replicon accession: NC_003910
• Strand: +
• Start bp: 4273464
• End bp: 4274072
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637286504
• Product: GTP cyclohydrolase II
• Protein accession: YP_270716
• Protein GI: 71282129
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0807] GTP cyclohydrolase II
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTA ATTTTGTTGA TTCATGTCGA CTACCCACGC ATTTAGGTGA GTTTGAAATG 
TATGGTTTCG TGGAAGAAAG TGGTCAGGAG CATATAATGT TAACCTATGG TGAGATAACT 
CCAGATAAGC CATTGTTAAT TAGACTTCAC TCTGAATGCT TAACTGGTGA TTCTTTATTT 
AGTATGCGAT GTGACTGTGG TTATCAACTA GAAACAGCAT TAGAAAACAT TGTTGATGCT 
GGCCAGGGTG CATTACTTTA TTTACGCCAA GAAGGTCGTG GTATTGGCTT AATTAATAAA 
ATTAAAGCTT ATCATTTACA GGACGATGGC GCCGATACTG TTGAAGCGAA TGAACAACTT 
GGCTTTGCCG CCGACTTGCG CCGTTACACT ATGTGTAAAC CAATGCTGGA ACATTTTCGT 
GTTAACAAAG TTAAATTATT GACCAATAAT CCGAAAAAAG TACAGGCATT AAAAGATTTG 
GGTATCGAAG TCGTTGAACA GATGCCAATT CAAGTTGGGC GCAACCAGTA CAATCATGAG 
TATTTAAACA CTAAAGCCGA AAGAATGGGT CATATGATGA CACATGGATT GTTAAGTGAT 
TTAGGGTAA 

 

Protein sequence

MSVNFVDSCR LPTHLGEFEM YGFVEESGQE HIMLTYGEIT PDKPLLIRLH SECLTGDSLF 
SMRCDCGYQL ETALENIVDA GQGALLYLRQ EGRGIGLINK IKAYHLQDDG ADTVEANEQL 
GFAADLRRYT MCKPMLEHFR VNKVKLLTNN PKKVQALKDL GIEVVEQMPI QVGRNQYNHE 
YLNTKAERMG HMMTHGLLSD LG