| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4050 |
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| Symbol | |
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| ID | 3523036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | - |
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| Start bp | 4260173 |
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| End bp | 4261126 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637286495 |
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| Product | membrane protein |
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| Protein accession | YP_270707 |
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| Protein GI | 71282561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.146235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCA ATCAATTACG CGGTATTTTT TACATGATGG CTGCCATGTT GCTGATATCC
GTTCAGGAAG CGTTAGCTAA ATATCTGGGA CAGGCACTGC CTGTAGCACA GGTGGTTTGG
GCTCGATATC TGGGACATCT GGTGTTGATG ATAATATTAC TCTGGCCGAA GAATGGCATG
AGCCTGCTGA AGACCAATAA ACTATTTATA CAAATTGCTC GCTCTCTGAT CCTGCTGATT
GATACTGTGC TGTTCTTTTT TGGATTGACG ATGCTTGGTC TGGCTGAAGC CACCGCTATT
TTCTTTACTG TACCGTTGTT AGTGTTATTG CTATCTATTC CTTTGCTTGG TGAGCGGGTG
AGCGCTTCAT CAATTGTGGC TGTTATAGTC GGATTCATTG GCACTTTGAT TATCGTTCGG
CCTGGCATCA ATGGCCTGGG TTCTTCGGAT CTTGGCATAG GTGCACTATT TATATTTGGA
GCGGCTTGCT GTACTGCTAT TTATAACGTC ACCACACGAA AACTTTCAGC TAGCGAGCCG
ATACCAGTTA CTTTGTTCTA TACCGCTATA GTCGGAGCTG TAGTAACCAG TTTATTTTTG
CCCTTCATTT GGGAGACTCC AACTAGTCTA GAGGTATGGG CTGCACTTAT TTTTATCGGT
CTATTTGGCG GGTCAGCTCA TAGCCTGATT ATCATTTCTC ATAAATATGC GGCTGCCACG
ACAGTCGCTC CTTTTATATA TTCACAGATA TTCTGGGCCT TGGGTCTTGG CTGGTTGATG
TTCGGGGAAC TACCTGATTT TTATGTCTAC TTTGGTGGAG CGATAGTTAT CAGCAGTGGA
CTGTACCTAT TTTATCATGG ACGAACGCGA GTAAATACTG CTAGCCAGCA GTTGGGTAAG
GATCCACTTT TGGTGAACGC TGCGAAGATT AAAGCACTAC AGAATAGGCC GTAG
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| Protein sequence | METNQLRGIF YMMAAMLLIS VQEALAKYLG QALPVAQVVW ARYLGHLVLM IILLWPKNGM
SLLKTNKLFI QIARSLILLI DTVLFFFGLT MLGLAEATAI FFTVPLLVLL LSIPLLGERV
SASSIVAVIV GFIGTLIIVR PGINGLGSSD LGIGALFIFG AACCTAIYNV TTRKLSASEP
IPVTLFYTAI VGAVVTSLFL PFIWETPTSL EVWAALIFIG LFGGSAHSLI IISHKYAAAT
TVAPFIYSQI FWALGLGWLM FGELPDFYVY FGGAIVISSG LYLFYHGRTR VNTASQQLGK
DPLLVNAAKI KALQNRP
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