| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4042 |
|---|
| Symbol | |
|---|
| ID | 3522885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Colwellia psychrerythraea 34H |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003910 |
|---|
| Strand | - |
|---|
| Start bp | 4251552 |
|---|
| End bp | 4252787 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637286487 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_270699 |
|---|
| Protein GI | 71282411 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00143061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATA ATAAAATCAA TGGTCAGCGT TTGTGGGATA GCTTGATGGA GATGGGGCAA
ATTGGTGGCA CACCCAAAGG TGGTGTTTGC CGGTTAGCTC TGACAGATCT CGATAAAGAG
GGGCGCGACC TCTTCGTTGA CTGGTGTCTG GAGGCTGGTT GTACTGTTCG TGTTGACACT
ATGGGTAACA TATTCGCCCG ACGGGCTGGT AAAGATAATA GTCTGCCACC TGTGGTGATG
GGCAGCCACC TAGATACTCA GCCGACGGGC GGTAAGTTTG ACGGTATTTA TGGTGTATTA
TCGGGACTGG AAGTGATCCG CAGTTTAAAC GATCACAATA TAGAGACCCT TGCTCCTGTT
GAAGCTTCTG TTTGGACAAA TGAAGAAGGA TCACGTTTCC CACCAGCGAT GGTGGCCTCT
GGGGTATTTG CCGGGGTTTT TGATCTTGAG TACGGTCTCA GTCGTGCCGA TCTCGATGGT
AAAACTATGG GGGACGAGCT TGCCCGCATT GGTTATGCCG GTGAAGTGGA GTGCGGTAAT
CGTGAATTCA AGGCGTTCTT CGAAGCGCAT ATCGAGCAGG GACCGATCCT CGAAAATGAA
AAGAAAACCA TTGGCATTGT GACTGATGCT CAGGGACAGC GATGGTATGA AGTGACACTT
ACAGGGCAGG AATCCCATGC CGGACCAACG CCGATGCTGA GTCGGAAAGA TGCACTGGTA
GGCGCTGCTA AGATTATTGA TCAGGTTAAC CGTATTGGTC TGAGTAACCA GCCTAGCGCT
TGTGCGACTG TTGGTCTGTT GCAGGTATTC CCTAATTCGC GCAACGTCAT TCCGGGAGAA
GTGTTTTTTA CAATTGATTT CCGTCATCCC AATGATCAGA TTCTGGCAGC AATGGACCAT
GAACTACGTG AGTTAAGCCA ACGAATTGCC GATGAGCAGG GCCTAGAAAT GAAGTTCGAG
CAGATCTGGC ACTCACCACC GGTACCTTTT AACAAAAACT GTGTCGATTC GGTACGGAAA
GCTGCTGAAA CGTCAGGTTA CAGCCACCAG GATATTATCA GTGGCGCTGG TCACGATGCC
TGTTATATCT CGCGGGTGGC ACCCACCGCT ATGGTATTTG TCCCTTGTGA AAATGGTATC
AGCCATAATG AAGCCGAAAA CGCTGATCCT GCCGATTTAG CGGCTGGCTG TGATGTGTTA
TTCCAAGCAG TCGTTGAACA GGCTAACGAC GCCTAA
|
|---|
| Protein sequence | MLNNKINGQR LWDSLMEMGQ IGGTPKGGVC RLALTDLDKE GRDLFVDWCL EAGCTVRVDT
MGNIFARRAG KDNSLPPVVM GSHLDTQPTG GKFDGIYGVL SGLEVIRSLN DHNIETLAPV
EASVWTNEEG SRFPPAMVAS GVFAGVFDLE YGLSRADLDG KTMGDELARI GYAGEVECGN
REFKAFFEAH IEQGPILENE KKTIGIVTDA QGQRWYEVTL TGQESHAGPT PMLSRKDALV
GAAKIIDQVN RIGLSNQPSA CATVGLLQVF PNSRNVIPGE VFFTIDFRHP NDQILAAMDH
ELRELSQRIA DEQGLEMKFE QIWHSPPVPF NKNCVDSVRK AAETSGYSHQ DIISGAGHDA
CYISRVAPTA MVFVPCENGI SHNEAENADP ADLAAGCDVL FQAVVEQAND A
|
|---|
| |