Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4021 |
Symbol | |
ID | 3519913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | - |
Start bp | 4223901 |
End bp | 4224962 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286467 |
Product | AraC family transcriptional regulator |
Protein accession | YP_270679 |
Protein GI | 71279454 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.322888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAG TACCATCAAC TAGCAGTCAG GCACAGATAA AATGTAAACA TATTGGTTTT TTATTACAAC CCAACTTTAC CATGTTAGCG TTGTCCTCGG CAATTGCGCC ATTGCGAATG GCCAATCAAT TGTCTGGAGA ACAACTATAT CGTTGGACTA TTCTCAGTGA AGATGGCGGC GTTGTTACTG CCAGTGATGG ACTGAAGATC GAGGTTGATT CTTGCATCAA TAACTATGTT GAGTTTGATA CTGTGTTGGT TTGTGGCGGT GTAGATATAA AAGGCACAGT GACGCGAAAA GTGCTTAGCT GGTTAACCCA TTTATCTCGC TGTAATATCG TGCTAGGCGG CATTTGCACG GGCAGTTATT TATTGGCTAA AGCGGGTTTA TTAAACGGCT ATCAAAGCAC CATTCATTGG GAATTGTTGG CGAGTTGTCA GGAAGAGTTC CCTTTAATAA AAAGCTCCAA TCAATTGTTT ATACTTGACC GTAATCGCAT GACTTGTTCA GGCGGTACAG CACCTATTGA TATGATGTTG CAGGTGATTT CTAAAGAGTA CGGTAAAGCT TTAACAACGG CTATTTCAGA CATGTTTTCT CATGAACATA TTCGTGATGA AAACGACCAG CAACGCATAC CATTACAGCA TATTGTTGGT GCTACTCAGT CAAAATTGCA AGATGTAGTC GCGTTAATGG AAGCAAATAT TGAAGAAATA TTATGCCTAG ATGAATTAGC TAGTTTTGTT GATTTATCTC GACGTCAGTT AGAGCGATTG TTTCAAAAAT ATCTCAACTG TTCGCCGCAT CGTTATTATT TACAGTTACG ATTAGGAAAA GCACGTCAGT TATTAAAGCA AACCAATATG TCTATTATTG AAATTGCTAT AGCATGTGGT TTTGTTTCTA CGCCGCATTT TAGTAAGTGT TATCGTAATT CTTTTAGCAT TCCGCCCCGA GATGAGCGCA ACGTTTTAGC TAAAAATAAG CAATTTGCTT CCAGTAAAGA ATCCAGCTTG GGATCGGTTA AGGTTCAACA TCAACATCAA CAACATCACT AA
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Protein sequence | MPLVPSTSSQ AQIKCKHIGF LLQPNFTMLA LSSAIAPLRM ANQLSGEQLY RWTILSEDGG VVTASDGLKI EVDSCINNYV EFDTVLVCGG VDIKGTVTRK VLSWLTHLSR CNIVLGGICT GSYLLAKAGL LNGYQSTIHW ELLASCQEEF PLIKSSNQLF ILDRNRMTCS GGTAPIDMML QVISKEYGKA LTTAISDMFS HEHIRDENDQ QRIPLQHIVG ATQSKLQDVV ALMEANIEEI LCLDELASFV DLSRRQLERL FQKYLNCSPH RYYLQLRLGK ARQLLKQTNM SIIEIAIACG FVSTPHFSKC YRNSFSIPPR DERNVLAKNK QFASSKESSL GSVKVQHQHQ QHH
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