Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPS_4006 |
Symbol | |
ID | 3521533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Colwellia psychrerythraea 34H |
Kingdom | Bacteria |
Replicon accession | NC_003910 |
Strand | + |
Start bp | 4203955 |
End bp | 4205181 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637286452 |
Product | hypothetical protein |
Protein accession | YP_270664 |
Protein GI | 71281064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.212328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAT CCATCCCATT ACTTGGTTTA TTGTTAGCAA GCTCAACAAC AGCCTGGGCG GCCACAGAAG AAACTAAAAT AGAGCGACTA GAACAACTTG AGAAACAAGT TGCTGAGCTT AAAAAAGAAG TTAATACCAA TACAAAAACC GCCACAGATT TAACACCTAA AATCAAAGTT GGCGGTGCCG TACGTTTTCA GTATAGCTAT GAAGATTACG ATGATGACAA TAAAGATCGT GGTGGAGATT TTGATTTTGA CGTCTTTCGT TTAGATGTAA ACGGCAGTAT TGGTGATGTT AAATTATCAG CTCAATATCG CTGGTATCAA TACATGAATG TAATTCATCA CGCCGATGTA GCCTACCAGT TCAGTGATAA CTGGGAAGGA AAAGTGGGTA TTACTCAAGT TCCTTTTGGT AACTTAAACT ATAACTCTAA CAACTTCTTC TTTAGCTCTG GTTATTATGC CGGTTTAGAA GATGACTACG ACTCAGGTTT ATCATTTATA GGTAAGTATG ACAAACATGA TATCCGTGTT GCCTATTTTT TAAATGACGA AAAAGGTGGT GTTGACGGTT ATTCAGGTGA CAAAACTCAT CGCTATTCTT ACGATGTAGT TGGCATTCGT GACTATGCTG GTGGCGAAGG TATTTACAGT GCTCCTGCGC AAGAAATGGG CGAGAGTAAT ACCATAAACT TAAGATATAC ATATAATTTC TTCTCTAATA CAGAAGTAGG TGTATCGTTA TTATCAGGTG ATCTTGAAGG TGGCTCAGGT GTTGGCTCTG TGGGCGATCA CACTGCATAC GCTTTTCATG TAAAAAGCAA AATTGAAAAT ATCGGTATTA TGTTCCAAGC TTCAGAGTAT GAATATGACC TAGACAACGG CTCTGATGCT GTCGCTGTAG GCGCTTGGGC ATTCTATGAC ACAATTCCAA CGGAAGCGAC GTCGTATAAC CTTAACTTAT CTTACAGCCA GTCAGTGTCT CTTGGACCTA TCACTAACCT GACTTACTAT AACGATTACA ACTTAATCAC TGATAAATCA GCCGGATTAG ACGATACCAC AATGAACGTA ACCGGTGTTG CGATCAGTGC TGGTGGCGTT TACGCTTATG TTGACTTTGT TATTGCTAAA AACCAACCAT TTATCGGTGG TACTTTAGTA GGCAATGCTG ATGATTGGAA CAAACGATTA AACATCAATA TCGGCTATTA CTTCTAA
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Protein sequence | MKTSIPLLGL LLASSTTAWA ATEETKIERL EQLEKQVAEL KKEVNTNTKT ATDLTPKIKV GGAVRFQYSY EDYDDDNKDR GGDFDFDVFR LDVNGSIGDV KLSAQYRWYQ YMNVIHHADV AYQFSDNWEG KVGITQVPFG NLNYNSNNFF FSSGYYAGLE DDYDSGLSFI GKYDKHDIRV AYFLNDEKGG VDGYSGDKTH RYSYDVVGIR DYAGGEGIYS APAQEMGESN TINLRYTYNF FSNTEVGVSL LSGDLEGGSG VGSVGDHTAY AFHVKSKIEN IGIMFQASEY EYDLDNGSDA VAVGAWAFYD TIPTEATSYN LNLSYSQSVS LGPITNLTYY NDYNLITDKS AGLDDTTMNV TGVAISAGGV YAYVDFVIAK NQPFIGGTLV GNADDWNKRL NINIGYYF
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